prot_M-pyrifera_M_contig94032.21705.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94032.21705.1
Unique Nameprot_M-pyrifera_M_contig94032.21705.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length239
Homology
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A482UL41_9ARCH (Rtt106 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UL41_9ARCH)

HSP 1 Score: 130 bits (326), Expect = 1.320e-32
Identity = 72/176 (40.91%), Postives = 108/176 (61.36%), Query Frame = 0
Query:   80 LHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPN------DSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTM----------VLKAMTGKSVLRPGSFKSQTGTSA 239
            LH+ ++     A + G  +AEFD+ +   L PRGR+++ELY TFMR+V   F++K+AY S+AR+F LP P+      D  R +L++SL+ P+  G  R PHLIM LD V ++ DL+  DA  R+      RY+G++ +  T+          +LK +TGK VL+PG+F+S TG SA
Sbjct:    2 LHALVAQGAGVAGLSGDAVAEFDEDVGQFLVPRGRYAIELYPTFMRLVGKTFEFKVAYKSIARMFMLPKPSPTVAAGDETRFLLVISLDDPLRHGNQRHPHLIMQLDRVPYSTDLNISDADLRSG-----RYEGLVKDSKTVTGDLHKVVGHLLKHVTGKPVLKPGAFRSSTGHSA 172          
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 124 bits (310), Expect = 7.750e-29
Identity = 70/225 (31.11%), Postives = 118/225 (52.44%), Query Frame = 0
Query:   14 VKRDDECLVQMRLFFPEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVGADAIFSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLSAMDAA--DRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTG 236
            + RD +CLV+MRL+ P+ +                                          F+AE+ H A+  +     + G ++ E D SL + L PRGR++LE+Y TF+RM  +K+D+KI Y  + +LF L  P+D   V  ++SL+KPV QGQ R+ HL++    V  TL+L+  +A   ++ +  LEP  +G L N++  + K+++G++V   G+++S  G
Sbjct:   97 LSRDKDCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPR-------------------FTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDR-YVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAG 301          
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A024G5S3_9STRA (Rtt106 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5S3_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.050e-28
Identity = 75/240 (31.25%), Postives = 119/240 (49.58%), Query Frame = 0
Query:    1 KEEVELIFGEDDTVKRDDECLVQMRLFFPEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVGADAIFSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLS-AMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 239
            K EVEL F EDDTV  D+E LV+MRL+ P  +A                                     ++ ++SAE+    +  +     + GK I E D+S+ + L PRGR+ +E+YG+F+RM    FD+KI YS++ R F L +PN       ++SLE+P+ QG+  +PHL++ L      +D++ +     +    +  R  G LP ++  + K + GK V   G FK+ +G  A
Sbjct:  846 KNEVELQFHEDDTVAGDEETLVEMRLYLPPSSAFSSSMQDEDVDGSENPAKKDSSQ--------------SEMLYSAEAFRDEVLHRANIRNVTGKSIVELDESIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGLNTAF-VISLEEPIRQGKQGYPHLVLQLSKEDVHIDVNLSTQEIQKYNGNIHERMSGALPQIVATIFKFVIGKKVYTSGKFKTHSGDRA 1070          
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: F0WCZ8_9STRA (FACT complex subunit SSRP1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCZ8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 6.920e-28
Identity = 74/240 (30.83%), Postives = 117/240 (48.75%), Query Frame = 0
Query:    1 KEEVELIFGEDDTVKRDDECLVQMRLFFPEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVGADAIFSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLS-AMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 239
            K EVEL F EDDTV  D+E LV+MRL+ P                                         ++ ++SAE+    +  +     + GK I E D+S+ + L PRGR+ +E+YG+F+RM    FD+KI YS++ R F L +PN       ++SLE+P+ QG+  +PHL++ L      +D++ +     +    +  R  G LP ++  + K + GK V   G FK+ +G  A
Sbjct:  199 KNEVELQFHEDDTVAGDEETLVEMRLYLPPSGTIGSSMQDEDEAENPARKDSSQ----------------SEMLYSAEAFRDEVLHRANIRNVTGKSIVELDESIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGLNTAF-VISLEEPIRQGKQGYPHLVLQLSKEDVHIDVNLSTQEIQKYNGNIHERMSGALPQIVATIFKFVIGKKVYTSGKFKTHSGDRA 421          
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A812WXA1_9DINO (FACT complex subunit SSRP1 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WXA1_9DINO)

HSP 1 Score: 115 bits (287), Expect = 5.710e-26
Identity = 79/250 (31.60%), Postives = 120/250 (48.00%), Query Frame = 0
Query:    3 EVELIFGEDDTVKRDDECLVQMRLFFPEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVGADAI----FSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVP----NDSG-----RVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 239
            E+E+   EDDT++R+DE LV+MRLFFP G                                  A    A+ +     SA  +H A+          G+  AEF + + + LAPRGR+++E+Y TF+R+V    ++K+ ++ ++R+F+LP P    ++ G     R   ++SL+ P+ QGQ R+PHL+M L +      L+      R  K L       LP  +  VLKA TGK + RP  F S  G  A
Sbjct:  166 EIEVQLQEDDTLEREDEALVEMRLFFPPGHGELDSADKAAQDGAVTSAALASGRAEPLEGEDSASGTPAERVRARLISAAGIHGAV----------GEAAAEFPERVGAFLAPRGRYAVEVYPTFLRLVGKSNEFKVTHAKISRMFYLPRPGAAKDEDGNPLPDRFYFVISLQDPLRQGQQRYPHLVMNLTTDQFECRLNCTPERLRDLK-LPAVVSDALPMTIAKVLKAFTGKKLFRPQHFSSSAGHKA 404          
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A5A8D8E2_CAFRO (FACT complex subunit SSRP1 n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D8E2_CAFRO)

HSP 1 Score: 115 bits (287), Expect = 1.070e-25
Identity = 79/250 (31.60%), Postives = 120/250 (48.00%), Query Frame = 0
Query:    3 EVELIFGEDDTVKRDDECLVQMRLFFPEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVGADAI----FSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVP----NDSG-----RVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 239
            E+E+   EDDT++R+DE LV+MRLFFP G                                  A    A+ +     SA  +H A+          G+  AEF + + + LAPRGR+++E+Y TF+R+V    ++K+ ++ ++R+F+LP P    ++ G     R   ++SL+ P+ QGQ R+PHL+M L +      L+      R  K L       LP  +  VLKA TGK + RP  F S  G  A
Sbjct:  146 EIEVQLQEDDTLEREDEALVEMRLFFPPGHGELDSADKAAQDGAVTSAALASGRAEPLEGEDSASGTPAERVRARLISAAGIHGAV----------GEAAAEFPERVGAFLAPRGRYAVEVYPTFLRLVGKSNEFKVTHAKISRMFYLPRPGAAKDEDGNPLPDRFYFVISLQDPLRQGQQRYPHLVMNLTTDQFECRLNCTPERLRDLK-LPAVVSDALPMTIAKVLKAFTGKKLFRPQHFSSSAGHKA 384          
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A5D6XJ40_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ40_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.770e-24
Identity = 57/171 (33.33%), Postives = 95/171 (55.56%), Query Frame = 0
Query:   70 GADAIFSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLS-AMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 239
            G D + +AE     +  +    A+ GK I + D+S+ + L PRGR+ +E+YG+F+RM    FD+KI YS++ R F L +PN       ++SLE+P+ QG+  +PHL++ L      +D++ + D   +    +  R  G LP ++  + K + GK V   G FK+ +G  A
Sbjct:  172 GTDDVMTAELFRDEVLQRANIRAVAGKSIVDLDESMGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGLNTAF-VISLEEPIRQGKQGYPHLVLQLSKEDVHIDVNLSPDEIKKYNGNIHERMSGALPQIVATLFKFIIGKKVYTSGKFKTHSGDRA 341          
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A7J7P2A3_9MAGN (FACT complex subunit SSRP1 n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7P2A3_9MAGN)

HSP 1 Score: 109 bits (272), Expect = 1.110e-23
Identity = 56/143 (39.16%), Postives = 91/143 (63.64%), Query Frame = 0
Query:   94 GGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMALDS---VSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKS 233
            G   +A FD    ++L PRGR+++EL+ TF+R+++A  D+KI YSSV RLF LP  N      ++V+L+ P+ +GQ  +PH+++  ++   +  TL LS    A + + +LE  YKG++  V TM+L+ ++G  V RPG F+S
Sbjct:  207 GAVAVAVFDG--IAILTPRGRYTVELHSTFLRLMAAANDFKIQYSSVVRLFLLPKSNQQ-HTFVVVTLDPPIRKGQTLYPHIVLQFETDYVIESTLTLSEDTLASKYKDKLEASYKGLIHEVFTMILRGLSGAKVTRPGKFRS 346          
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A1V9YJM5_9STRA (FACT complex subunit SSRP1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YJM5_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.470e-23
Identity = 62/166 (37.35%), Postives = 95/166 (57.23%), Query Frame = 0
Query:   76 SAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMAL--DSVSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 239
            SAES    + A+   + I GK I E D+S+ + L PRGR+++ELYG+F+RM    +D+KI YS++ R F L  PN S     ++SLE+P+ QG+  +PHL++ L  D V   ++L+A D        +  R  G LP ++  + K + GK V   G F + +G  A
Sbjct:  178 SAESFKDDVLARANISNITGKSIVELDESMGTFLTPRGRYAIELYGSFLRMHGKTYDYKIMYSNINRCFLLEYPN-STNTAFVISLEEPIRQGKQGYPHLVLQLARDEVHIDVNLTA-DEIKAYDGNIHERMSGALPQIVATLFKFIIGKKVYTSGKFVTHSGDRA 341          
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A024TYY0_9STRA (FACT complex subunit SSRP1 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TYY0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.490e-23
Identity = 63/171 (36.84%), Postives = 98/171 (57.31%), Query Frame = 0
Query:   71 ADAIFSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMAL--DSVSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 239
            AD   +AESL   I  +   + + GK I E D+S+ + L PRGR+++ELYG+F+RM    +D+KI YS++ R F L  PN S     ++SLE+P+ QG+  +PHL++ L  D V   ++LSA +   +    +  R  G LP ++  + K + GK V   G F + +G  A
Sbjct:  174 ADDGVTAESLKDEILERANISHVTGKSIVELDESMGTFLTPRGRYAVELYGSFLRMHGKTYDYKILYSNINRCFLLEYPN-STNTAFVISLEEPIRQGKQGYPHLVLQLARDEVHIDVNLSA-EEIKKYNGNIHERMSGSLPQIVATLFKFIMGKKVYTSGKFVTHSGDRA 342          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482UL41_9ARCH1.320e-3240.91Rtt106 domain-containing protein (Fragment) n=1 Ta... [more]
A0A836C825_9STRA7.750e-2931.11FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
A0A024G5S3_9STRA3.050e-2831.25Rtt106 domain-containing protein n=1 Tax=Albugo ca... [more]
F0WCZ8_9STRA6.920e-2830.83FACT complex subunit SSRP1 n=1 Tax=Albugo laibachi... [more]
A0A812WXA1_9DINO5.710e-2631.60FACT complex subunit SSRP1 n=1 Tax=Symbiodinium sp... [more]
A0A5A8D8E2_CAFRO1.070e-2531.60FACT complex subunit SSRP1 n=3 Tax=Cafeteria roenb... [more]
A0A5D6XJ40_9STRA1.770e-2433.33FACT complex subunit SSRP1 n=1 Tax=Pythium brassic... [more]
A0A7J7P2A3_9MAGN1.110e-2339.16FACT complex subunit SSRP1 n=1 Tax=Kingdonia unifl... [more]
A0A1V9YJM5_9STRA1.470e-2337.35FACT complex subunit SSRP1 n=4 Tax=Saprolegniaceae... [more]
A0A024TYY0_9STRA1.490e-2336.84FACT complex subunit SSRP1 n=7 Tax=Aphanomyces Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 218..231
score: 34.82
coord: 132..148
score: 59.56
coord: 110..126
score: 41.18
NoneNo IPR availableGENE3D2.30.29.150coord: 88..226
e-value: 4.9E-31
score: 109.2
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 1..239
NoneNo IPR availablePANTHERPTHR45849FAMILY NOT NAMEDcoord: 1..239
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 95..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94032contigM-pyrifera_M_contig94032:30..746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94032.21705.1mRNA_M-pyrifera_M_contig94032.21705.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94032 30..746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94032.21705.1 ID=prot_M-pyrifera_M_contig94032.21705.1|Name=mRNA_M-pyrifera_M_contig94032.21705.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=239bp
KEEVELIFGEDDTVKRDDECLVQMRLFFPEGAAPPTKSGGGGEGEDGASS
SSSSSSSSSSSSSSSAGLVGADAIFSAESLHSAISAQTRSAAIGGKIIAE
FDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPN
DSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLSAMDAADRAQKE
LEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition