mRNA_M-pyrifera_M_contig94032.21705.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A482UL41_9ARCH (Rtt106 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UL41_9ARCH) HSP 1 Score: 130 bits (326), Expect = 1.320e-32 Identity = 72/176 (40.91%), Postives = 108/176 (61.36%), Query Frame = 1 Query: 238 LHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPN------DSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTM----------VLKAMTGKSVLRPGSFKSQTGTSA 717 LH+ ++ A + G +AEFD+ + L PRGR+++ELY TFMR+V F++K+AY S+AR+F LP P+ D R +L++SL+ P+ G R PHLIM LD V ++ DL+ DA R+ RY+G++ + T+ +LK +TGK VL+PG+F+S TG SA Sbjct: 2 LHALVAQGAGVAGLSGDAVAEFDEDVGQFLVPRGRYAIELYPTFMRLVGKTFEFKVAYKSIARMFMLPKPSPTVAAGDETRFLLVISLDDPLRHGNQRHPHLIMQLDRVPYSTDLNISDADLRSG-----RYEGLVKDSKTVTGDLHKVVGHLLKHVTGKPVLKPGAFRSSTGHSA 172
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA) HSP 1 Score: 124 bits (310), Expect = 7.750e-29 Identity = 70/225 (31.11%), Postives = 118/225 (52.44%), Query Frame = 1 Query: 40 VKRDDECLVQMRLFFPEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVGADAIFSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLSAMDAA--DRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTG 708 + RD +CLV+MRL+ P+ + F+AE+ H A+ + + G ++ E D SL + L PRGR++LE+Y TF+RM +K+D+KI Y + +LF L P+D V ++SL+KPV QGQ R+ HL++ V TL+L+ +A ++ + LEP +G L N++ + K+++G++V G+++S G Sbjct: 97 LSRDKDCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPR-------------------FTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDR-YVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAG 301
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A024G5S3_9STRA (Rtt106 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5S3_9STRA) HSP 1 Score: 122 bits (307), Expect = 3.050e-28 Identity = 75/240 (31.25%), Postives = 119/240 (49.58%), Query Frame = 1 Query: 1 KEEVELIFGEDDTVKRDDECLVQMRLFFPEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVGADAIFSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLS-AMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 717 K EVEL F EDDTV D+E LV+MRL+ P +A ++ ++SAE+ + + + GK I E D+S+ + L PRGR+ +E+YG+F+RM FD+KI YS++ R F L +PN ++SLE+P+ QG+ +PHL++ L +D++ + + + R G LP ++ + K + GK V G FK+ +G A Sbjct: 846 KNEVELQFHEDDTVAGDEETLVEMRLYLPPSSAFSSSMQDEDVDGSENPAKKDSSQ--------------SEMLYSAEAFRDEVLHRANIRNVTGKSIVELDESIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGLNTAF-VISLEEPIRQGKQGYPHLVLQLSKEDVHIDVNLSTQEIQKYNGNIHERMSGALPQIVATIFKFVIGKKVYTSGKFKTHSGDRA 1070
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: F0WCZ8_9STRA (FACT complex subunit SSRP1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCZ8_9STRA) HSP 1 Score: 121 bits (303), Expect = 6.920e-28 Identity = 74/240 (30.83%), Postives = 117/240 (48.75%), Query Frame = 1 Query: 1 KEEVELIFGEDDTVKRDDECLVQMRLFFPEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVGADAIFSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLS-AMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 717 K EVEL F EDDTV D+E LV+MRL+ P ++ ++SAE+ + + + GK I E D+S+ + L PRGR+ +E+YG+F+RM FD+KI YS++ R F L +PN ++SLE+P+ QG+ +PHL++ L +D++ + + + R G LP ++ + K + GK V G FK+ +G A Sbjct: 199 KNEVELQFHEDDTVAGDEETLVEMRLYLPPSGTIGSSMQDEDEAENPARKDSSQ----------------SEMLYSAEAFRDEVLHRANIRNVTGKSIVELDESIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGLNTAF-VISLEEPIRQGKQGYPHLVLQLSKEDVHIDVNLSTQEIQKYNGNIHERMSGALPQIVATIFKFVIGKKVYTSGKFKTHSGDRA 421
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A812WXA1_9DINO (FACT complex subunit SSRP1 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WXA1_9DINO) HSP 1 Score: 115 bits (287), Expect = 5.710e-26 Identity = 79/250 (31.60%), Postives = 120/250 (48.00%), Query Frame = 1 Query: 7 EVELIFGEDDTVKRDDECLVQMRLFFPEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVGADAI----FSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVP----NDSG-----RVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 717 E+E+ EDDT++R+DE LV+MRLFFP G A A+ + SA +H A+ G+ AEF + + + LAPRGR+++E+Y TF+R+V ++K+ ++ ++R+F+LP P ++ G R ++SL+ P+ QGQ R+PHL+M L + L+ R K L LP + VLKA TGK + RP F S G A Sbjct: 166 EIEVQLQEDDTLEREDEALVEMRLFFPPGHGELDSADKAAQDGAVTSAALASGRAEPLEGEDSASGTPAERVRARLISAAGIHGAV----------GEAAAEFPERVGAFLAPRGRYAVEVYPTFLRLVGKSNEFKVTHAKISRMFYLPRPGAAKDEDGNPLPDRFYFVISLQDPLRQGQQRYPHLVMNLTTDQFECRLNCTPERLRDLK-LPAVVSDALPMTIAKVLKAFTGKKLFRPQHFSSSAGHKA 404
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A5A8D8E2_CAFRO (FACT complex subunit SSRP1 n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D8E2_CAFRO) HSP 1 Score: 115 bits (287), Expect = 1.070e-25 Identity = 79/250 (31.60%), Postives = 120/250 (48.00%), Query Frame = 1 Query: 7 EVELIFGEDDTVKRDDECLVQMRLFFPEGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLVGADAI----FSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVP----NDSG-----RVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 717 E+E+ EDDT++R+DE LV+MRLFFP G A A+ + SA +H A+ G+ AEF + + + LAPRGR+++E+Y TF+R+V ++K+ ++ ++R+F+LP P ++ G R ++SL+ P+ QGQ R+PHL+M L + L+ R K L LP + VLKA TGK + RP F S G A Sbjct: 146 EIEVQLQEDDTLEREDEALVEMRLFFPPGHGELDSADKAAQDGAVTSAALASGRAEPLEGEDSASGTPAERVRARLISAAGIHGAV----------GEAAAEFPERVGAFLAPRGRYAVEVYPTFLRLVGKSNEFKVTHAKISRMFYLPRPGAAKDEDGNPLPDRFYFVISLQDPLRQGQQRYPHLVMNLTTDQFECRLNCTPERLRDLK-LPAVVSDALPMTIAKVLKAFTGKKLFRPQHFSSSAGHKA 384
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A5D6XJ40_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ40_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.770e-24 Identity = 57/171 (33.33%), Postives = 95/171 (55.56%), Query Frame = 1 Query: 208 GADAIFSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMALDSVSHTLDLS-AMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 717 G D + +AE + + A+ GK I + D+S+ + L PRGR+ +E+YG+F+RM FD+KI YS++ R F L +PN ++SLE+P+ QG+ +PHL++ L +D++ + D + + R G LP ++ + K + GK V G FK+ +G A Sbjct: 172 GTDDVMTAELFRDEVLQRANIRAVAGKSIVDLDESMGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGLNTAF-VISLEEPIRQGKQGYPHLVLQLSKEDVHIDVNLSPDEIKKYNGNIHERMSGALPQIVATLFKFIIGKKVYTSGKFKTHSGDRA 341
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A7J7P2A3_9MAGN (FACT complex subunit SSRP1 n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7P2A3_9MAGN) HSP 1 Score: 109 bits (272), Expect = 1.110e-23 Identity = 56/143 (39.16%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 280 GGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMALDS---VSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKS 699 G +A FD ++L PRGR+++EL+ TF+R+++A D+KI YSSV RLF LP N ++V+L+ P+ +GQ +PH+++ ++ + TL LS A + + +LE YKG++ V TM+L+ ++G V RPG F+S Sbjct: 207 GAVAVAVFDG--IAILTPRGRYTVELHSTFLRLMAAANDFKIQYSSVVRLFLLPKSNQQ-HTFVVVTLDPPIRKGQTLYPHIVLQFETDYVIESTLTLSEDTLASKYKDKLEASYKGLIHEVFTMILRGLSGAKVTRPGKFRS 346
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A1V9YJM5_9STRA (FACT complex subunit SSRP1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YJM5_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.470e-23 Identity = 62/166 (37.35%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 226 SAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMAL--DSVSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 717 SAES + A+ + I GK I E D+S+ + L PRGR+++ELYG+F+RM +D+KI YS++ R F L PN S ++SLE+P+ QG+ +PHL++ L D V ++L+A D + R G LP ++ + K + GK V G F + +G A Sbjct: 178 SAESFKDDVLARANISNITGKSIVELDESMGTFLTPRGRYAIELYGSFLRMHGKTYDYKIMYSNINRCFLLEYPN-STNTAFVISLEEPIRQGKQGYPHLVLQLARDEVHIDVNLTA-DEIKAYDGNIHERMSGALPQIVATLFKFIIGKKVYTSGKFVTHSGDRA 341
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Match: A0A024TYY0_9STRA (FACT complex subunit SSRP1 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TYY0_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.490e-23 Identity = 63/171 (36.84%), Postives = 98/171 (57.31%), Query Frame = 1 Query: 211 ADAIFSAESLHSAISAQTRSAAIGGKIIAEFDDSLCSMLAPRGRFSLELYGTFMRMVSAKFDWKIAYSSVARLFHLPVPNDSGRVMLIVSLEKPVYQGQHRFPHLIMAL--DSVSHTLDLSAMDAADRAQKELEPRYKGMLPNVLTMVLKAMTGKSVLRPGSFKSQTGTSA 717 AD +AESL I + + + GK I E D+S+ + L PRGR+++ELYG+F+RM +D+KI YS++ R F L PN S ++SLE+P+ QG+ +PHL++ L D V ++LSA + + + R G LP ++ + K + GK V G F + +G A Sbjct: 174 ADDGVTAESLKDEILERANISHVTGKSIVELDESMGTFLTPRGRYAVELYGSFLRMHGKTYDYKILYSNINRCFLLEYPN-STNTAFVISLEEPIRQGKQGYPHLVLQLARDEVHIDVNLSA-EEIKKYNGNIHERMSGSLPQIVATLFKFIMGKKVYTSGKFVTHSGDRA 342 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94032.21705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig94032.21705.1 >prot_M-pyrifera_M_contig94032.21705.1 ID=prot_M-pyrifera_M_contig94032.21705.1|Name=mRNA_M-pyrifera_M_contig94032.21705.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=239bp KEEVELIFGEDDTVKRDDECLVQMRLFFPEGAAPPTKSGGGGEGEDGASSback to top mRNA from alignment at M-pyrifera_M_contig94032:30..746+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig94032.21705.1 ID=mRNA_M-pyrifera_M_contig94032.21705.1|Name=mRNA_M-pyrifera_M_contig94032.21705.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=717bp|location=Sequence derived from alignment at M-pyrifera_M_contig94032:30..746+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig94032:30..746+ >mRNA_M-pyrifera_M_contig94032.21705.1 ID=mRNA_M-pyrifera_M_contig94032.21705.1|Name=mRNA_M-pyrifera_M_contig94032.21705.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1434bp|location=Sequence derived from alignment at M-pyrifera_M_contig94032:30..746+ (Macrocystis pyrifera P11B4 male)back to top |