prot_M-pyrifera_M_contig94007.21701.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94007.21701.1
Unique Nameprot_M-pyrifera_M_contig94007.21701.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length118
Homology
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Match: A0A7R9V8A7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V8A7_9CHLO)

HSP 1 Score: 109 bits (272), Expect = 1.240e-27
Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = 0
Query:    6 LEKGLGSTSGGAGTALELMGASGGGKRSIITFVRGLDKMLGGGVALGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVPSRLREVAVALEEHLKSM 117
            ++ G G  +G A +A  L  A    KR I+TF    D++LGGGVA GQ+TEF GVPG+GKTQ+ +QLAVDVQIP + GGVGG A+YIDTEGSF   R  +VA A   HL  M
Sbjct:   75 IDSGSGGGNGRAVSATALYEAQRRSKR-IVTFCADFDRVLGGGVAAGQVTEFCGVPGIGKTQLGMQLAVDVQIPAAFGGVGGKAVYIDTEGSFASDRAHDVASAAVRHLDRM 185          
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Match: A0A7S3DLM5_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DLM5_9EUKA)

HSP 1 Score: 111 bits (278), Expect = 5.330e-27
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 0
Query:   34 IITFVRGLDKMLGGGVALGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVPSRLREVAVALEEHLKSMV 118
            IITF +G+D MLGGGV+L ++TEF G+PG+GKTQ+ +QL  +VQIP   GGV G ALY+DTEGSF P R+ ++A+AL +HL  MV
Sbjct:  111 IITFCQGMDSMLGGGVSLREMTEFSGIPGIGKTQLAMQLCANVQIPAFFGGVEGEALYVDTEGSFTPERMNDIAIALHKHLLHMV 195          
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Match: UPI0014551BA8 (DNA repair protein RAD51 homolog 3-like isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI0014551BA8)

HSP 1 Score: 111 bits (277), Expect = 1.050e-26
Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = 0
Query:   33 SIITFVRGLDKMLGGGVALGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVPSRLREVAVALEEHLKSM 117
            +I+TF   LD+MLGGGV L ++TE  G PGVGKTQ C+QLAVDVQIP+  GGV G A+Y+DTEGSF+P R  ++AVA+ EH + +
Sbjct:  105 AIVTFCEDLDEMLGGGVPLSKITEICGAPGVGKTQTCIQLAVDVQIPQCFGGVEGEAIYVDTEGSFIPQRAADMAVAMVEHCRGI 189          
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Match: A0A8B7XZR5_ACAPL (DNA repair protein RAD51 homolog 3-like isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XZR5_ACAPL)

HSP 1 Score: 110 bits (275), Expect = 2.220e-26
Identity = 52/86 (60.47%), Postives = 67/86 (77.91%), Query Frame = 0
Query:   33 SIITFVRGLDKMLGGGVALGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVPSRLREVAVALEEHLKSMV 118
            +I+TF   LD+MLGGGV L ++TE  G PGVGKTQ C+QLAVDVQIP+  GGV G A+YIDTEGSF+P R  ++A+A+ EH + +V
Sbjct:  106 AIVTFCEDLDEMLGGGVPLCKITELCGAPGVGKTQTCIQLAVDVQIPQCFGGVDGEAIYIDTEGSFLPQRAADMALAMVEHCRQIV 191          
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Match: A0A5A8E3R9_CAFRO (RECA_2 domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3R9_CAFRO)

HSP 1 Score: 110 bits (275), Expect = 3.590e-26
Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 0
Query:   34 IITFVRGLDKMLGGGVALGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVPSRLREVAVALEEHLKSM 117
            I+TF RG+D +LGGG+  G++TE VGVPGVGKTQ+C QLAVD  +PK+ GGV G  LYIDTEGSF P R  ++A AL  H++ M
Sbjct:  107 IVTFCRGIDTLLGGGMPTGEVTEVVGVPGVGKTQLCTQLAVDASLPKAFGGVDGQTLYIDTEGSFTPDRCAQMADALSAHVRGM 190          
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Match: A0A5J4Y699_9CHLO (DNA repair RAD51 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y699_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 5.130e-26
Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 0
Query:   32 RSIITFVRGLDKMLGGGVALGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVPSRLREVAVALEEHLKSM 117
            R IITF   LD MLGGGVA GQ+TEF GVP VGKTQ+ +QLA+DVQIP + GG+   A+YIDTEGSF+  R+ E+A A   HLK +
Sbjct:   52 RKIITFCGDLDGMLGGGVATGQITEFCGVPAVGKTQLGIQLAIDVQIPAAFGGLAASAVYIDTEGSFMVERIVEIADACIRHLKKL 137          
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Match: A0A7S4M6D8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M6D8_9EUKA)

HSP 1 Score: 106 bits (264), Expect = 6.980e-26
Identity = 52/74 (70.27%), Postives = 60/74 (81.08%), Query Frame = 0
Query:   41 LDKMLGGGVALGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVPSRLREVAVALEEHL 114
            +D+MLGGGV  G++TEF GVPGVGKTQ  LQLAVDV IP S+GG  G  +YIDTEGSFVP R+RE+A AL EHL
Sbjct:    2 IDEMLGGGVPRGKITEFCGVPGVGKTQFGLQLAVDVHIPMSMGGAQGRCIYIDTEGSFVPERVREMATALVEHL 75          
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Match: A0A7L0DRJ3_TROML (RA51C protein (Fragment) n=1 Tax=Trogon melanurus TaxID=56311 RepID=A0A7L0DRJ3_TROML)

HSP 1 Score: 104 bits (259), Expect = 1.010e-25
Identity = 59/116 (50.86%), Postives = 78/116 (67.24%), Query Frame = 0
Query:    5 ELEKGLGSTSGGAG-----TALELMGASGGGKRSIITFVRGLDKMLGGGVALGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVPSRLREVAVALEEHLK 115
            E  +G   T+GG+G     TALEL+      +  IITF   LD +LGGGV L ++TE  G PGVGKTQ+C+QLAVDVQIP+  GGV G A++IDTEGSF+  R+ ++A A  +H +
Sbjct:   19 ECHRGAARTAGGSGATRKCTALELLEEEQA-QGFIITFCSALDTILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVADIAAACVQHCR 133          
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Match: UPI00148A3B53 (DNA repair protein RAD51 homolog 3-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A3B53)

HSP 1 Score: 107 bits (267), Expect = 1.780e-25
Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 0
Query:   34 IITFVRGLDKMLGGGVALGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVPSRLREVAVALEEHLKSM 117
            IITF  GLD MLGGGV L ++TEF G PGVGKTQ+C+Q+AVDVQIP   GG+ G A+YIDTEGSF+  RL ++A A  +H   M
Sbjct:   90 IITFSEGLDNMLGGGVPLCKITEFCGAPGVGKTQMCMQIAVDVQIPSQFGGLQGEAVYIDTEGSFIVERLVDIAKATVDHCNEM 173          
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Match: A0A6G1Q1D2_9TELE (DNA repair protein RAD51-like protein 3 n=1 Tax=Channa argus TaxID=215402 RepID=A0A6G1Q1D2_9TELE)

HSP 1 Score: 107 bits (266), Expect = 2.030e-25
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0
Query:   32 RSIITFVRGLDKMLGGGVALGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVPSRLREVAVALEEHLKSMV 118
            RSI+TF   LD +LGGG+ +G++TE  G PGVGKTQ+CLQLAVDVQ+P   GG+GG  +YIDTEGSF+  R+ +VA A+  H   +V
Sbjct:   85 RSIVTFCSQLDTVLGGGLPVGKITEVCGAPGVGKTQLCLQLAVDVQVPPCFGGIGGQVIYIDTEGSFLVQRVVDVATAVVRHCSQLV 171          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94007.21701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9V8A7_9CHLO1.240e-2755.36Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A7S3DLM5_9EUKA5.330e-2760.00Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
UPI0014551BA81.050e-2660.00DNA repair protein RAD51 homolog 3-like isoform X1... [more]
A0A8B7XZR5_ACAPL2.220e-2660.47DNA repair protein RAD51 homolog 3-like isoform X1... [more]
A0A5A8E3R9_CAFRO3.590e-2660.71RECA_2 domain-containing protein n=5 Tax=Cafeteria... [more]
A0A5J4Y699_9CHLO5.130e-2661.63DNA repair RAD51 n=1 Tax=Trebouxia sp. A1-2 TaxID=... [more]
A0A7S4M6D8_9EUKA6.980e-2670.27Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A7L0DRJ3_TROML1.010e-2550.86RA51C protein (Fragment) n=1 Tax=Trogon melanurus ... [more]
UPI00148A3B531.780e-2561.90DNA repair protein RAD51 homolog 3-like n=1 Tax=Cr... [more]
A0A6G1Q1D2_9TELE2.030e-2557.47DNA repair protein RAD51-like protein 3 n=1 Tax=Ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 34..107
e-value: 1.7E-22
score: 79.9
NoneNo IPR availableGENE3D3.40.50.300coord: 18..118
e-value: 9.0E-28
score: 99.4
NoneNo IPR availablePANTHERPTHR46239FAMILY NOT NAMEDcoord: 12..117
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 30..118
score: 26.11
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 34..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94007contigM-pyrifera_M_contig94007:394..747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94007.21701.1mRNA_M-pyrifera_M_contig94007.21701.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94007 382..747 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94007.21701.1 ID=prot_M-pyrifera_M_contig94007.21701.1|Name=mRNA_M-pyrifera_M_contig94007.21701.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
MTVGELEKGLGSTSGGAGTALELMGASGGGKRSIITFVRGLDKMLGGGVA
LGQLTEFVGVPGVGKTQVCLQLAVDVQIPKSLGGVGGCALYIDTEGSFVP
SRLREVAVALEEHLKSMV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase