prot_M-pyrifera_M_contig94003.21700.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94003.21700.1
Unique Nameprot_M-pyrifera_M_contig94003.21700.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length217
Homology
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BLAST of mRNA_M-pyrifera_M_contig94003.21700.1 vs. uniprot
Match: A0A6H5KW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW72_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.110e-8
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 0 
Query:    1 VPVLHRESFRRGGLKSGTLVRYRGLVQGMFSPELMAVAGEE----EGSRNLRATKFQDAV---PRGVSVSSDRSDLMANRITLYLVPPPGESQWA 88
            VP+L RES  +G L + +LVRYRG+VQ  + PE    + EE     G RN    K+ D++   P  V+          +R+ L+ VP PG+SQWA
Sbjct:   64 VPILSRESLAKGKLAANSLVRYRGMVQDQYEPEYFVGSFEELETATGKRNRVDVKYVDSIAQRPGFVNEYDGPGAKTMDRLPLFCVPIPGQSQWA 158
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BLAST of mRNA_M-pyrifera_M_contig94003.21700.1 vs. uniprot
Match: A0A3S1AWI1_ELYCH (Mini-chromosome maintenance complex-binding protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1AWI1_ELYCH)

HSP 1 Score: 57.8 bits (138), Expect = 3.180e-6
Identity = 54/209 (25.84%), Postives = 79/209 (37.80%), Query Frame = 0 
Query:   14 LKSGTLVRYRGLVQGMFSPELMA----VAGEEEGSRNLRATKFQDAVPRGVSVSSDRSDLMA---NRITLYLVPPPGESQWAKECGDYTTWKKARPKPKDSTESARMRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKRXXXXXXXXXXXXXXXXXXXXSGKGVVASTATVPGLDAYFPLPGESGVPALVRLY----DVEGISPIHV 211
            L SGT+V+YR +VQ +F P+       V     G   L    F+D    G + ++D   L +    R ++Y VP PGE+ W KE  D       R  P  ST +AR +R                            D                       SG     ++  +P L+   PLP E GVP +VR+Y    D++  S + +
Sbjct:   61 LSSGTVVKYRCMVQDVFDPQYFVGRYKVTNSGSGQTRLECGSFRDVPLIGPNETADFDSLQSVTVERHSVYCVPIPGEANWVKEINDKQC---RRMTPSTSTSAAREKRGRDHEGEEEMESDHKVTREERSTVGPGGDPSHDKPTEGLDDQMSGVQ-----SGGPAPKTSPKLPSLN--MPLPNEQGVPCIVRVYSGNVDLKATSVVEI 259
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BLAST of mRNA_M-pyrifera_M_contig94003.21700.1 vs. uniprot
Match: A0A7S2W7Z4_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W7Z4_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.200e-6
Identity = 30/94 (31.91%), Postives = 51/94 (54.26%), Query Frame = 0 
Query:    1 VPVLHRESFRRGGLKSGTLVRYRGLVQGMFSPEL---MAVAGEEEGSRNLRATKFQDA-VPRGVSVSSDRSDLMANRITLYLVPPPGESQWAKE 90
            +P L +   + G L SGTLVRYR +VQ +F PE    +    + +G+     +++QD  +P+G +    + + +  R+  Y V  PGES W ++
Sbjct:   55 IPWLTKAGIQSGKLSSGTLVRYRAMVQDIFDPEYFDGVLNVMQADGTLKKVTSRYQDVFIPKGDAKVVAQGEHLMERVPYYCVSVPGESDWCRK 148
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94003.21700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KW72_9PHAE1.110e-838.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3S1AWI1_ELYCH3.180e-625.84Mini-chromosome maintenance complex-binding protei... [more]
A0A7S2W7Z4_9STRA3.200e-631.91Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019140Mini-chromosome maintenance complex-binding proteinPFAMPF09739MCM_bindcoord: 2..216
e-value: 8.8E-24
score: 83.9
IPR019140Mini-chromosome maintenance complex-binding proteinPANTHERPTHR13489UNCHARACTERIZEDcoord: 13..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94003contigM-pyrifera_M_contig94003:2..652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94003.21700.1mRNA_M-pyrifera_M_contig94003.21700.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94003 2..652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94003.21700.1 ID=prot_M-pyrifera_M_contig94003.21700.1|Name=mRNA_M-pyrifera_M_contig94003.21700.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
VPVLHRESFRRGGLKSGTLVRYRGLVQGMFSPELMAVAGEEEGSRNLRAT
KFQDAVPRGVSVSSDRSDLMANRITLYLVPPPGESQWAKECGDYTTWKKA
RPKPKDSTESARMRRKRRLEEPEEKKEEDGGVVGERSDDVVERDVKRAKE
EAVGVGGEEEEEEEEEESGKGVVASTATVPGLDAYFPLPGESGVPALVRL
YDVEGISPIHVGDLVEI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019140MCM_complex-bd