prot_M-pyrifera_M_contig93992.21693.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93992.21693.1
Unique Nameprot_M-pyrifera_M_contig93992.21693.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length76
Homology
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Match: A0A8B8Q0P5_9MYRT (50S ribosomal protein L3-2, mitochondrial isoform X2 n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8Q0P5_9MYRT)

HSP 1 Score: 77.0 bits (188), Expect = 2.700e-15
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 0
Query:    2 EALTAEWTPFSKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQVKTRAHDGVDALQVGCSTPKLKRVAKP 76
            EA++    P SKRTG++A+KCGM  ++D  G RVP+SVL VD   V QVKT   +G+ ALQ+GC   K K + KP
Sbjct:   47 EAVSGVMGPASKRTGIIAVKCGMTAQWDKWGARVPLSVLWVDDNIVCQVKTVEKEGIFALQIGCGQKKEKHLTKP 121          
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Match: A0A2P6QZP0_ROSCH (Putative ribosomal protein L3 n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6QZP0_ROSCH)

HSP 1 Score: 77.8 bits (190), Expect = 2.890e-15
Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    2 EALTAEWTPFSKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQVKTRAHDGVDALQVGCSTPKLKRVAKP 76
            EA     TP SKRTG++A+KCGM   +D  G RVP++VL VD   V QVKT   +G+ ALQ+GC   K K + KP
Sbjct:   68 EARPGVMTPQSKRTGVIAVKCGMSARWDKWGARVPITVLWVDDNIVSQVKTPEKEGISALQIGCGQKKAKHLTKP 142          
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Match: A0A8J9S0H0_9CHLO (50S ribosomal protein L3 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S0H0_9CHLO)

HSP 1 Score: 76.3 bits (186), Expect = 5.340e-15
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    9 TPFSKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQVKTRAHDGVDALQVGCSTPKLKRVAK 75
            TP ++R G+LA+K GM  E+D  G RVP++VL +D CQVVQVKT A +G  ALQVGC + + K+V K
Sbjct:   11 TPETRRCGVLAVKAGMTQEWDQWGARVPLTVLWIDNCQVVQVKTPAREGYLALQVGCGSKRPKQVNK 77          
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Match: A0A176VR44_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VR44_MARPO)

HSP 1 Score: 77.0 bits (188), Expect = 6.930e-15
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 0
Query:    2 EALTAEWTPFSKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQVKTRAHDGVDALQVGCSTPKLKRVAKP 76
            EA     +P S+RTG++A+KCGM   +D  G+RVPV+VL VD  QVVQVKT+  +G +ALQ+G    K K++ KP
Sbjct:  103 EAKPKLMSPESRRTGVVAVKCGMTAVWDRWGSRVPVTVLWVDDNQVVQVKTKGKEGHNALQIGAGQKKAKQLTKP 177          
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Match: UPI001C7B8ABD (Uncharacterized protein n=2 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C7B8ABD)

HSP 1 Score: 75.1 bits (183), Expect = 8.820e-15
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    2 EALTAEWTPFSKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQVKTRAHDGVDALQVGCSTPKLKRVAKP 76
            E +    TP SKRTG++A+KCGM   +D  G RVP++VL VD   V QVKT   +G+ ALQ+GC   K K + KP
Sbjct:   50 ENILRAMTPNSKRTGVIAVKCGMTALWDKWGARVPITVLWVDDNIVSQVKTVEKEGITALQIGCGQKKAKHLTKP 124          
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Match: D8RAR7_SELML (Uncharacterized protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RAR7_SELML)

HSP 1 Score: 75.5 bits (184), Expect = 9.780e-15
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0
Query:   12 SKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQVKTRAHDGVDALQVGCSTPKLKRVAKP 76
            S+RTGL+A+KCGM   +D  G R+P++VL  D  QVVQVKT  H+G +ALQVGC   K K+++ P
Sbjct:    5 SRRTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQLSIP 69          
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Match: A0A087HAC9_ARAAL (Uncharacterized protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087HAC9_ARAAL)

HSP 1 Score: 76.3 bits (186), Expect = 1.020e-14
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    2 EALTAEWTPFSKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQVKTRAHDGVDALQVGCSTPKLKRVAKP 76
            EA   E +P SKRTG++A+KCGM   +D  G RVP+S+L VD   V QVKT   +G+ ALQ+GC   K K + KP
Sbjct:   63 EAKQGEMSPRSKRTGIIAVKCGMTALWDKWGARVPISILWVDDNIVSQVKTIEKEGIFALQIGCGHKKPKHLTKP 137          
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Match: A0A2N9EID6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EID6_FAGSY)

HSP 1 Score: 76.6 bits (187), Expect = 1.030e-14
Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    9 TPFSKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQVKTRAHDGVDALQVGCSTPKLKRVAKP 76
            TP SKRTGL+A+KCGM   +D  G RVP++VL VD   V QVKT   +G+ ALQ+GC   K K + KP
Sbjct:   73 TPKSKRTGLIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTPEKEGISALQIGCGQKKAKHLTKP 140          
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Match: A0A6A1VLD7_9ROSI (50S ribosomal protein L3-2, chloroplastic n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VLD7_9ROSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.040e-14
Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    2 EALTAEWTPFSKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQVKTRAHDGVDALQVGCSTPKLKRVAKP 76
            + L+   TP SKRTGL+A+KCGM   +D  G R+P+S+L VD   V QVKT   +G+ ALQ+GC   K K + KP
Sbjct:   65 QKLSRVMTPNSKRTGLIAVKCGMSALWDKWGARIPISILWVDDNIVSQVKTIDKEGITALQIGCGQKKAKHLTKP 139          
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Match: A0A2I0IH49_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IH49_PUNGR)

HSP 1 Score: 74.7 bits (182), Expect = 1.160e-14
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    9 TPFSKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQVKTRAHDGVDALQVGCSTPKLKRVAKP 76
            TP SKRTGL+A+KCGM   +D  G R+P+S+L VD   V QVKT   +G+ ALQ+GC   K K + KP
Sbjct:    2 TPNSKRTGLIAVKCGMTALWDKWGARIPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKEKHLTKP 69          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93992.21693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8B8Q0P5_9MYRT2.700e-1550.6750S ribosomal protein L3-2, mitochondrial isoform ... [more]
A0A2P6QZP0_ROSCH2.890e-1550.67Putative ribosomal protein L3 n=2 Tax=Rosoideae Ta... [more]
A0A8J9S0H0_9CHLO5.340e-1555.2250S ribosomal protein L3 n=1 Tax=Coccomyxa sp. Obi... [more]
A0A176VR44_MARPO6.930e-1550.67Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
UPI001C7B8ABD8.820e-1549.33Uncharacterized protein n=2 Tax=Carya illinoinensi... [more]
D8RAR7_SELML9.780e-1553.85Uncharacterized protein (Fragment) n=4 Tax=Selagin... [more]
A0A087HAC9_ARAAL1.020e-1450.67Uncharacterized protein n=2 Tax=Arabis TaxID=50451... [more]
A0A2N9EID6_FAGSY1.030e-1454.41Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A6A1VLD7_9ROSI1.040e-1449.3350S ribosomal protein L3-2, chloroplastic n=1 Tax=... [more]
A0A2I0IH49_PUNGR1.160e-1452.94Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.10coord: 1..71
e-value: 1.6E-11
score: 46.0
NoneNo IPR availablePANTHERPTHR11229:SF839S RIBOSOMAL PROTEIN L3, MITOCHONDRIALcoord: 5..75
IPR019927Ribosomal protein L3, bacterial/organelle-typePANTHERPTHR1122950S RIBOSOMAL PROTEIN L3coord: 5..75
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 8..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93992contigM-pyrifera_M_contig93992:518..745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93992.21693.1mRNA_M-pyrifera_M_contig93992.21693.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93992 518..745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93992.21693.1 ID=prot_M-pyrifera_M_contig93992.21693.1|Name=mRNA_M-pyrifera_M_contig93992.21693.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
SEALTAEWTPFSKRTGLLAIKCGMRTEYDAHGNRVPVSVLQVDQCQVVQV
KTRAHDGVDALQVGCSTPKLKRVAKP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019927Ribosomal_L3_bac/org-type
IPR009000Transl_B-barrel_sf