prot_M-pyrifera_M_contig93944.21686.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93944.21686.1
Unique Nameprot_M-pyrifera_M_contig93944.21686.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length43
Homology
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Match: UPI001CC36E8E (nucleotidyltransferase domain-containing protein n=1 Tax=Arachnia rubra TaxID=1547448 RepID=UPI001CC36E8E)

HSP 1 Score: 58.9 bits (141), Expect = 4.660e-9
Identity = 27/40 (67.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    4 ASVAGRISALLGSMESEHGVRVLWCVESGSRAWGMESPDS 43
            A+  GRI A L  +E EHGVRV+W VESGSRAWG  SPDS
Sbjct:   24 AATVGRIQARLDEVELEHGVRVVWAVESGSRAWGFPSPDS 63          
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Match: A0A6J4FBY5_9PROT (Uncharacterized protein n=1 Tax=Magnetospirillum sp. UT-4 TaxID=2681467 RepID=A0A6J4FBY5_9PROT)

HSP 1 Score: 56.2 bits (134), Expect = 4.060e-8
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    6 VAGRISALLGSMESEHGVRVLWCVESGSRAWGMESPDS 43
            V GR+ A+L  +E EHG+R+L+ VESGSRAWG  SPDS
Sbjct:    9 VRGRVGAILDRVEREHGIRILFAVESGSRAWGFASPDS 46          
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Match: A0A3N4CW17_9ACTN (Nucleotidyltransferase domain-containing protein n=4 Tax=Arachnia TaxID=2801844 RepID=A0A3N4CW17_9ACTN)

HSP 1 Score: 56.2 bits (134), Expect = 4.100e-8
Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    4 ASVAGRISALLGSMESEHGVRVLWCVESGSRAWGMESPDS 43
            A+   RI A L  +E +HGVRVLW VESGSRAWG  SPDS
Sbjct:   11 AATVERIQARLDEVERDHGVRVLWAVESGSRAWGFPSPDS 50          
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Match: A0A0Q7KJG0_9ACTN (Nucleotidyltransferase n=3 Tax=Aeromicrobium TaxID=2040 RepID=A0A0Q7KJG0_9ACTN)

HSP 1 Score: 55.8 bits (133), Expect = 5.650e-8
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    4 ASVAGRISALLGSMESEHGVRVLWCVESGSRAWGMESPDS 43
            ASV   I A L  +ES+HGVR+ W +ESGSRAWG  SPDS
Sbjct:   10 ASVVTEIGARLAGVESDHGVRIPWAIESGSRAWGFPSPDS 49          
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Match: A0A4Q5QNT8_9BACT (Uncharacterized protein n=1 Tax=Cytophagaceae bacterium TaxID=2026729 RepID=A0A4Q5QNT8_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 7.610e-8
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    9 RISALLGSMESEHGVRVLWCVESGSRAWGMESPDS 43
            RIS  L ++E+EHG+R+L+  ESGSRAWG  SPDS
Sbjct:    4 RISRALAALEAEHGIRILYACESGSRAWGFPSPDS 38          
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Match: UPI000F76999B (nucleotidyltransferase domain-containing protein n=1 Tax=Antribacter gilvus TaxID=2304675 RepID=UPI000F76999B)

HSP 1 Score: 53.9 bits (128), Expect = 2.820e-7
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    5 SVAGRISALLGSMESEHGVRVLWCVESGSRAWGMESPDS 43
            +V   I   L  +ES+HGVRVLW +ESGSRAWG  SPDS
Sbjct:   11 AVVAAIDDRLDRVESDHGVRVLWAIESGSRAWGFPSPDS 49          
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Match: A0A3P1TAC4_9ACTN (Nucleotidyltransferase domain-containing protein n=1 Tax=Arachnia propionica TaxID=1750 RepID=A0A3P1TAC4_9ACTN)

HSP 1 Score: 53.5 bits (127), Expect = 3.850e-7
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    5 SVAGRISALLGSMESEHGVRVLWCVESGSRAWGMESPDS 43
            +V  +I A L  +E+EHGV V+W VESGSRAWG  SPDS
Sbjct:   12 AVVQQIQARLDEVETEHGVAVVWAVESGSRAWGFPSPDS 50          
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Match: A0A3P1WTK0_9ACTN (Nucleotidyltransferase domain-containing protein n=1 Tax=Arachnia propionica TaxID=1750 RepID=A0A3P1WTK0_9ACTN)

HSP 1 Score: 53.1 bits (126), Expect = 5.310e-7
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    5 SVAGRISALLGSMESEHGVRVLWCVESGSRAWGMESPDS 43
            +V  +I   L  +E+EHGV VLW VESGSRAWG  SPDS
Sbjct:   12 TVVQQIQTRLDGVETEHGVAVLWAVESGSRAWGFPSPDS 50          
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Match: A0A4R9DW28_9STRE (Nucleotidyltransferase domain-containing protein n=2 Tax=Streptococcus TaxID=1301 RepID=A0A4R9DW28_9STRE)

HSP 1 Score: 53.1 bits (126), Expect = 5.350e-7
Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 0
Query:   14 LGSMESEHGVRVLWCVESGSRAWGMESPDS 43
            L  +E EHG+ VLW VESGSRAWG ESPDS
Sbjct:   15 LREIEEEHGIEVLWAVESGSRAWGFESPDS 44          
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Match: A0A0C5XC65_NOCSI (Nucleotidyltransferase n=1 Tax=Nocardioides simplex TaxID=2045 RepID=A0A0C5XC65_NOCSI)

HSP 1 Score: 52.8 bits (125), Expect = 7.290e-7
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    5 SVAGRISALLGSMESEHGVRVLWCVESGSRAWGMESPDS 43
            S    + A L  + +EHGVRV+W +ESGSRAWG  SPDS
Sbjct:   11 SAVAAVDARLAGVAAEHGVRVVWAIESGSRAWGFPSPDS 49          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93944.21686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001CC36E8E4.660e-967.50nucleotidyltransferase domain-containing protein n... [more]
A0A6J4FBY5_9PROT4.060e-863.16Uncharacterized protein n=1 Tax=Magnetospirillum s... [more]
A0A3N4CW17_9ACTN4.100e-865.00Nucleotidyltransferase domain-containing protein n... [more]
A0A0Q7KJG0_9ACTN5.650e-862.50Nucleotidyltransferase n=3 Tax=Aeromicrobium TaxID... [more]
A0A4Q5QNT8_9BACT7.610e-862.86Uncharacterized protein n=1 Tax=Cytophagaceae bact... [more]
UPI000F76999B2.820e-761.54nucleotidyltransferase domain-containing protein n... [more]
A0A3P1TAC4_9ACTN3.850e-761.54Nucleotidyltransferase domain-containing protein n... [more]
A0A3P1WTK0_9ACTN5.310e-761.54Nucleotidyltransferase domain-containing protein n... [more]
A0A4R9DW28_9STRE5.350e-773.33Nucleotidyltransferase domain-containing protein n... [more]
A0A0C5XC65_NOCSI7.290e-756.41Nucleotidyltransferase n=1 Tax=Nocardioides simple... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018775RNA repair pathway DNA polymerase betaPFAMPF10127RlaPcoord: 9..43
e-value: 1.1E-7
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93944contigM-pyrifera_M_contig93944:620..748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93944.21686.1mRNA_M-pyrifera_M_contig93944.21686.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93944 620..748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93944.21686.1 ID=prot_M-pyrifera_M_contig93944.21686.1|Name=mRNA_M-pyrifera_M_contig93944.21686.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=43bp
AVCASVAGRISALLGSMESEHGVRVLWCVESGSRAWGMESPDS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018775RlaP