prot_M-pyrifera_M_contig93642.21628.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93642.21628.1
Unique Nameprot_M-pyrifera_M_contig93642.21628.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length152
Homology
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Match: A0A7S4HIR7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HIR7_9EUKA)

HSP 1 Score: 144 bits (364), Expect = 1.110e-40
Identity = 79/147 (53.74%), Postives = 107/147 (72.79%), Query Frame = 0
Query:    6 SCCAAAACXXXXXXXXXXXGLLVTVSKSVATRVWYTVLFVVLGALAWALSMWAYELLGWIPWPAAEACTEEYCGVVAVYKLTFGMVVFHAALALVLLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYYAWVSVFAA 152
            SCC A AC XXXXXXXXX G  +T +KS+ATRV YT +FV L  +AW  SM+AYE+L +IP+   + C E  CG  +VY++TF M  FHA L++ L+GVR+++D+RAQLNDGWW +K+PL   +++AAF  P  F+TYYAW ++  A
Sbjct:    1 SCCTALACSXXXXXXXXXFGYAMTFTKSIATRVLYTSIFVALSVVAWIFSMYAYEILEYIPY-INDTCYEGTCGAFSVYRITFAMFFFHALLSIFLIGVRNAKDIRAQLNDGWWPLKIPLLCIIIVAAFFTPNVFFTYYAWAAIVGA 146          
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Match: A0A151Z6Q4_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z6Q4_9MYCE)

HSP 1 Score: 94.7 bits (234), Expect = 5.590e-20
Identity = 48/123 (39.02%), Postives = 76/123 (61.79%), Query Frame = 0
Query:   30 VSKSVATRVWYTVLFVVLGALAWALSMWAYELLGWIPWPAAEACTEEYCGVVAVYKLTFGMVVFHAALALVLLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYYAWVSVFAA 152
            V KS  TR+ Y   F++L  LA+  S ++++ L  I      +   E  G + V++++FG+ ++H  LAL+L+GV+SS D RA++ DG W +K+ L   L+ AAF IP SF+ YY W+ +F A
Sbjct:   22 VRKSTVTRIIYVFFFLLLAVLAYVFSYFSFDWLNNIDILKICSQNNECYGALVVFRISFGLALYHVLLALILIGVKSSGDGRAKIQDGLWPIKILLLAGLIFAAFFIPNSFFIYYGWICIFGA 144          
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Match: SERIC_DICDI (Probable serine incorporator n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=SERIC_DICDI)

HSP 1 Score: 91.3 bits (225), Expect = 9.870e-19
Identity = 46/127 (36.22%), Postives = 79/127 (62.20%), Query Frame = 0
Query:   29 TVSKSVATRVWYTVLFVVLGALAWALSMWAYELLGWIPWPAAEACTE---EYCGVVAVYKLTFGMVVFHAALALVLLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYYAWVSVFAA 152
            ++ KS +TR+ Y V F+++  +A+ LS W +     +     + C++   E  G + VY+LTFG+ ++H  L LV++ V+S+ D RA+L DG+W +K+ L   L+  +F IP SF+  Y W+S+F+A
Sbjct:   15 SIKKSTSTRLVYVVFFLLVSIVAYILSYWTFSWFNNLD--VLKICSKGDNECKGALVVYRLTFGLALYHILLGLVMINVKSAGDSRAKLQDGYWPLKILLLGVLIFVSFFIPNSFFRVYTWISIFSA 139          
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Match: UPI0006448652 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448652)

HSP 1 Score: 86.7 bits (213), Expect = 8.060e-18
Identity = 47/123 (38.21%), Postives = 71/123 (57.72%), Query Frame = 0
Query:   30 VSKSVATRVWYTVLFVVLGALAWALSMWAYELLGWIPWPAAEACTEEYCGVVAVYKLTFGMVVFHAALALVLLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYYAWVSVFAA 152
            + KS  TR+ Y + F+++  L++  S +AY     I      +  +E  G + VY+LTF + V+H  L LVL+GV+SS + RA + DG+W +KL       +  F IP SF+ YYAWVS+  A
Sbjct:   34 IKKSTGTRMLYVINFMIVSILSYLFSSYAYSWFKNIDVFKVCSHDDECYGSLVVYRLTFALAVYHILLGLVLIGVKSSENGRASIQDGYWPLKLLFLAGFTVVTFFIPNSFFKYYAWVSLVGA 156          
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Match: D3BLM9_POLPP (TMS membrane protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BLM9_POLPP)

HSP 1 Score: 87.8 bits (216), Expect = 1.770e-17
Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 0
Query:   30 VSKSVATRVWYTVLFVVLGALAWALSMWAYELLGWIPWPAAEACTE---EYCGVVAVYKLTFGMVVFHAALALVLLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYYAWVSVFAA 152
            + KS  TRV Y + F+++  +++ LS +A +    +     + C++   E  G + VY+LTF + ++H  L L L+GV+SS D RA + DG+W VK+     L  A+F IP +F+ YY W+S+F A
Sbjct:   23 IKKSTGTRVIYVIFFLLVSVISYILSAFASQWFASVD--VLKICSKYDNECFGSLVVYRLTFSLAIYHILLGLALIGVKSSEDSRAAIQDGYWPVKIFFLAGLSFASFFIPNTFFVYYGWISLFGA 146          
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Match: F0ZKQ7_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZKQ7_DICPU)

HSP 1 Score: 86.3 bits (212), Expect = 5.890e-17
Identity = 41/125 (32.80%), Postives = 76/125 (60.80%), Query Frame = 0
Query:   29 TVSKSVATRVWYTVLFVVLGALAWALSMWAYELLGWIPWPAAEACTEEYC-GVVAVYKLTFGMVVFHAALALVLLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYYAWVSVFAA 152
            ++ KS +TR+ Y V F+++  +A+  S W++  +  + +    +  +  C G + VY+LTFG+ ++H  LA+V++GV+S  + RA+  DG+W VK+ +   L+  +F IP  F+  Y W ++F A
Sbjct:   11 SIKKSTSTRLIYIVFFLLVSVIAYVFSYWSFSWVDSLDFLKVCSKEDNACVGALLVYRLTFGLALYHLLLAVVMIGVKSGGEGRAKFQDGYWPVKVLMLAGLITVSFFIPNKFFVVYGWAAIFCA 135          
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Match: F4PVI0_CAVFA (TMS membrane protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PVI0_CAVFA)

HSP 1 Score: 86.3 bits (212), Expect = 6.350e-17
Identity = 47/131 (35.88%), Postives = 76/131 (58.02%), Query Frame = 0
Query:   25 GLLVTVSKSVATRVWYTVLFVVLGALAWALSMWAYELLGWIPWPAAEACTE---EYCGVVAVYKLTFGMVVFHAALALVLLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYYAWVSVFAA 152
            G ++++ KS  TR +Y           WA S W  ++         + C++   E  G + VY+LTFG+ V+H  LAL+L+GV+++ + RAQ+ DG+W VK+ L   ++ A+F IP  F+ YY W+S+F A
Sbjct:   35 GSVLSLKKSTCTRTFY-----------WAFS-WFADI------DVLQICSKQDNECYGALVVYRLTFGLAVYHILLALILIGVKNTENPRAQIQDGYWPVKIVLLAGIIFASFFIPNQFFVYYGWISLFGA 147          
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Match: A0A4P9YX93_9FUNG (Serine incorporator/TMS membrane protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YX93_9FUNG)

HSP 1 Score: 84.0 bits (206), Expect = 4.900e-16
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 0
Query:   31 SKSVATRVWYTVLFVVLGALAWA-LSMWAYELLGWIPWPAAEA-CTEEYC-GVVAVYKLTFGMVVFHAALALVLLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYY 144
            S S+ATRV Y +LF+V   ++W  LS WA E L  +     E  C E YC GV+AV++  F +  FH  L   ++GVR++RD RAQ+ +GWW  KL L   LV+ +F +P  F+ ++
Sbjct:   31 SGSIATRVGYALLFLVNSLISWLMLSDWAVERLRQLFHGYLEIKCPEGYCYGVIAVHRFGFALACFHILLGCSMIGVRNTRDARAQIQNGWWGPKLLLWLGLVVLSFVMPNEFHMFW 147          
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Match: A0A068RVC9_9FUNG (Related to tms1 protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RVC9_9FUNG)

HSP 1 Score: 84.0 bits (206), Expect = 5.150e-16
Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 0
Query:    4 VASCCAAAACXXXXXXXXXXXGLLVTVSKSVATRVWYTVLFVVLGALAWA-LSMWAYELLGWIPWPAAEA-CTEEYC-GVVAVYKLTFGMVVFHAALALVLLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYYAWVSVFA 151
            +ASC +AAAC                 + S+ATR+ Y ++F++   LAW  LS WA + L  I     +  C+E  C G++AV+++ F +V+FHA L  +LLGVR SR  RA + +GWW  K+ L   L+  AF IP  F+    W + FA
Sbjct:   20 IASCFSAAACSLFCKSCNC--------NNSIATRIGYAIIFLLNSILAWLMLSNWAIKQLQRITLDYMKLECSEGTCYGIIAVHRVCFALVLFHALLGCLLLGVRDSRQKRAAIQNGWWGPKVLLWIALLAVAFFIPNGFFM--VWGNYFA 160          
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Match: A0A1Y2EPY0_9BASI (Putative membrane protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2EPY0_9BASI)

HSP 1 Score: 83.6 bits (205), Expect = 7.300e-16
Identity = 46/124 (37.10%), Postives = 72/124 (58.06%), Query Frame = 0
Query:   31 SKSVATRVWYTVLFVVLGALAW---------ALSMWAYELLGWIPWPAAEACTEEYC-GVVAVYKLTFGMVVFHAALALVLLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYY 144
            + SVATRV +++LF++   LAW         A++ W+YE +          C E  C GV+AV+++ F + +FHA LA +L+GV+ +R  RA + +GWW  K+     L +AAF IP  F+ +Y
Sbjct:   47 NSSVATRVGFSLLFLLNSLLAWLMLTDWAVKAIAKWSYEYI-------KMQCEEGRCYGVLAVHRICFALALFHAILACLLIGVKDTRTKRAAIQNGWWGPKVAACMLLTVAAFFIPNGFFMFY 163          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93642.21628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4HIR7_9EUKA1.110e-4053.74Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A151Z6Q4_9MYCE5.590e-2039.02Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
SERIC_DICDI9.870e-1936.22Probable serine incorporator n=1 Tax=Dictyostelium... [more]
UPI00064486528.060e-1838.21hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3BLM9_POLPP1.770e-1736.51TMS membrane protein n=1 Tax=Polysphondylium palli... [more]
F0ZKQ7_DICPU5.890e-1732.80Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
F4PVI0_CAVFA6.350e-1735.88TMS membrane protein n=1 Tax=Cavenderia fasciculat... [more]
A0A4P9YX93_9FUNG4.900e-1641.88Serine incorporator/TMS membrane protein n=1 Tax=S... [more]
A0A068RVC9_9FUNG5.150e-1637.75Related to tms1 protein n=2 Tax=Lichtheimia TaxID=... [more]
A0A1Y2EPY0_9BASI7.300e-1637.10Putative membrane protein n=1 Tax=Leucosporidium c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005016Serine incorporator/TMS membrane proteinPFAMPF03348Serinccoord: 6..152
e-value: 7.6E-28
score: 97.6
IPR005016Serine incorporator/TMS membrane proteinPANTHERPTHR10383SERINE INCORPORATORcoord: 8..152
IPR029559Membrane protein Tms1-likePANTHERPTHR10383:SF9SERINE INCORPORATOR 3coord: 8..152
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..123
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..104
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 10..31
NoneNo IPR availableTMHMMTMhelixcoord: 80..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93642contigM-pyrifera_M_contig93642:3..458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93642.21628.1mRNA_M-pyrifera_M_contig93642.21628.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93642 3..458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93642.21628.1 ID=prot_M-pyrifera_M_contig93642.21628.1|Name=mRNA_M-pyrifera_M_contig93642.21628.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp
MGLVASCCAAAACSCCIGLSCSCCGLLVTVSKSVATRVWYTVLFVVLGAL
AWALSMWAYELLGWIPWPAAEACTEEYCGVVAVYKLTFGMVVFHAALALV
LLGVRSSRDVRAQLNDGWWAVKLPLAFFLVLAAFCIPYSFYTYYAWVSVF
AA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005016TDE1/TMS
IPR029559Tms1-like