prot_M-pyrifera_M_contig93551.21609.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93551.21609.1
Unique Nameprot_M-pyrifera_M_contig93551.21609.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Match: A0A7C1YIZ2_9GAMM (Helix-turn-helix domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1YIZ2_9GAMM)

HSP 1 Score: 162 bits (410), Expect = 2.000e-47
Identity = 81/124 (65.32%), Postives = 94/124 (75.81%), Query Frame = 0
Query:    1 MNWAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRRGLQSLIESGLLDSEPRYRNDGSNSSNRYRLQLGGGDNLSPTPDSGDRPPGHVCQGPPDTRVTPRTTTGIQNESP 124
            MNWAW + L P  KL+LMAL+DAADD G+CWPSV+T+A K  VSTRTVRR +Q LI   +L +EPR+R+DGS SSNRYRL +GGGD LSP PD GD  PGH+ QGP DT V P TT G Q ESP
Sbjct:    1 MNWAWHQDLKPVPKLVLMALADAADDQGICWPSVATVAAKVGVSTRTVRRVMQGLIRCQVLTAEPRHRSDGSCSSNRYRLLMGGGDRLSPAPDGGDTTPGHLSQGPLDTGVIPGTTIGTQKESP 124          
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Match: A0A7C5Q9X1_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5Q9X1_9GAMM)

HSP 1 Score: 140 bits (352), Expect = 7.860e-39
Identity = 72/124 (58.06%), Postives = 86/124 (69.35%), Query Frame = 0
Query:    1 MNWAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRRGLQSLIESGLLDSEPRYRNDGSNSSNRYRLQLGGGDNLSPTPDSGDRPPGHVCQGPPDTRVTPRTTTGIQNESP 124
            MNWAW++ L P  KL+L+AL+DAADD GVCWP V+T+A K   S RTVRR ++ L+   LL +EPRYR DG+ SSNRYRL L GGD LSP P + D  P    QGPPD  V P TT G + ESP
Sbjct:    1 MNWAWRQPLPPTPKLVLLALADAADDAGVCWPGVATVAAKVGCSPRTVRRVMKRLVARTLLVAEPRYRADGACSSNRYRLLLEGGDRLSPAPGTADTAPARRGQGPPDATVIPGTTRGTERESP 124          
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Match: A0A7C5N341_9HYPH (Helix-turn-helix domain-containing protein n=1 Tax=Devosia sp. TaxID=1871048 RepID=A0A7C5N341_9HYPH)

HSP 1 Score: 106 bits (264), Expect = 1.580e-25
Identity = 61/124 (49.19%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    3 WAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRRGLQSLIESGLLDSEPRYRNDGSNSSNRYRLQLGGGDNLSPTP--DSGDRPPGHVCQGPPDTRVTPRTTTGIQNESP 124
            W  +++L P  KL+L+AL ++AD+ GVCWPSV T+A++C++S RTV+R LQ L   GL+  EPRYR DGS +SNRY L L  GD +S  P    G  PP     G  DT VTP TT     +SP
Sbjct:    8 WGLRQKLPPTPKLVLVALGESADEQGVCWPSVPTLARRCSLSVRTVQRILQDLEARGLIRIEPRYRADGSRTSNRYILLLDKGDPVSERPVVPDGALPPRRPSAG--DTPVTPGTTREPSRKSP 129          
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Match: A0A239B703_9PROT (Helix-turn-helix domain-containing protein n=2 Tax=Methylobacillus rhizosphaerae TaxID=551994 RepID=A0A239B703_9PROT)

HSP 1 Score: 102 bits (254), Expect = 3.080e-24
Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 0
Query:    1 MNWAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRRGLQSLIESGLLDSEPRYRNDGSNSSNRYRLQLGG-GDNLSPT 91
            MNWAWQ RL P++KL+LMAL+DAADD+G CWPS++T+A K  +  R+V+R L+ L  S  ++ + R+RNDGS +SNRY L +   GD LSPT
Sbjct:    1 MNWAWQLRLRPSIKLVLMALADAADDEGCCWPSITTLAHKACMDERSVQRILKILRNSHYIEVQARFRNDGSPASNRYYLAMRPKGDKLSPT 92          
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Match: UPI0010E260F6 (helix-turn-helix domain-containing protein n=1 Tax=Crenobacter luteus TaxID=1452487 RepID=UPI0010E260F6)

HSP 1 Score: 98.6 bits (244), Expect = 3.570e-24
Identity = 55/106 (51.89%), Postives = 65/106 (61.32%), Query Frame = 0
Query:    1 MNWAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRRGLQSLIESGLLDSEPRYRNDGSNSSNRYRLQLGG--------GDNLSPTPDSGDRP 98
            MNWAW++RL PN KLILMAL+DAAD+ G CWP V  IA+KC  S RTV+R L+ L  +G L  E  YR DG  SSN Y L L           D L+P   +GD P
Sbjct:    6 MNWAWEQRLPPNSKLILMALADAADEVGQCWPRVRLIAEKCCTSERTVQRVLKELEAAGFLHIERNYRKDGGQSSNVYSLSLAPPSDKSSPPSDRLAPGGGTGDTP 111          
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Match: UPI001673B140 (helix-turn-helix domain-containing protein n=6 Tax=Pseudomonas syringae group TaxID=136849 RepID=UPI001673B140)

HSP 1 Score: 102 bits (253), Expect = 4.160e-24
Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = 0
Query:    1 MNWAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRRGLQSLIESGLLDSEPRYRNDGSNSSNRYRL--QLGGGDNLSPTP------DSGDRPPG--HVCQG 105
            MNWAW+++LSP+ KLILMA++DAAD++G CWP V TIAKKC VS RTV+R L+  +   L+   PR+  D    SN YRL  Q    DNLSP        D  D  PG    CQG
Sbjct:    6 MNWAWEQKLSPSSKLILMAIADAADEEGDCWPKVKTIAKKCGVSDRTVQRVLKEFVSGNLISVTPRFSQDRRQVSNNYRLNPQNHYPDNLSPPQAPRSRRDEADVAPGVPQKCQG 120          
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Match: UPI001FD262B4 (helix-turn-helix domain-containing protein n=2 Tax=Xanthomonas TaxID=338 RepID=UPI001FD262B4)

HSP 1 Score: 97.1 bits (240), Expect = 1.950e-23
Identity = 55/110 (50.00%), Postives = 65/110 (59.09%), Query Frame = 0
Query:    2 NWAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRRGLQSLIESGLLDSEPRYRNDGSNSSNRYRL------------QLGGGDNLSPTPDSGDRPP 99
            NWAW++RL PN KLILMAL+D+AD+ G CWP V  IA+KC  S RTV+R L+ L E G L  E R+R DG  SSN Y L             L   D LSP  D+   PP
Sbjct:    7 NWAWEQRLPPNSKLILMALADSADEIGKCWPRVRLIAEKCCASERTVQRVLKELEERGFLHIERRFRGDGGQSSNAYYLCLESPPVNLSSPSLTSSDKLSPGGDAAVTPP 116          
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Match: A0A6A7ZJD6_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas helleri TaxID=1608996 RepID=A0A6A7ZJD6_9PSED)

HSP 1 Score: 99.8 bits (247), Expect = 3.090e-23
Identity = 47/93 (50.54%), Postives = 62/93 (66.67%), Query Frame = 0
Query:    2 NWAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRRGLQSLIESGLLDSEPRYRNDGSNSSNRYRLQLGGGDNLSPTPDS 94
            NWAW ++L PN KLILMA++DAAD++G CWP + TIAKKC VS RTV+R L+  I +  +    RY ++G   SN YRL       L+P PD+
Sbjct:    7 NWAWDQQLPPNAKLILMAIADAADEEGNCWPKIKTIAKKCGVSQRTVQRALKDFISNNFISVTARYSHEGRQVSNNYRLSY-----LNPYPDN 94          
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Match: K0M9H0_BORPB (Uncharacterized protein n=11 Tax=Proteobacteria TaxID=1224 RepID=K0M9H0_BORPB)

HSP 1 Score: 100 bits (248), Expect = 3.680e-23
Identity = 54/91 (59.34%), Postives = 62/91 (68.13%), Query Frame = 0
Query:    1 MNWAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRRGLQSLIESGLLDSEPRYRNDGSNSSNRYRLQLGGG-DNLSP 90
            MNWAW++RL PN KLILMAL+DAAD+ G CWP V  IA+KC  S RTV+R L+ L  +G L  E  YR DGS SSN Y L L    D LSP
Sbjct:    6 MNWAWEQRLPPNSKLILMALADAADEVGQCWPRVRLIAEKCCTSERTVQRVLKELEAAGFLHIERNYRKDGSQSSNVYSLSLASPPDKLSP 96          
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Match: UPI000D004D21 (helix-turn-helix domain-containing protein n=1 Tax=Burkholderia multivorans TaxID=87883 RepID=UPI000D004D21)

HSP 1 Score: 99.0 bits (245), Expect = 1.000e-22
Identity = 50/82 (60.98%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 MNWAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRRGLQSLIESGLLDSEPRYRNDGSNSSNRYRLQL 82
            MNWAW++RL PN KLILMAL+DAAD+ G CWP V  IA+KC  S RTV+R L+ L  +G L  E  YR DGS SSN Y L L
Sbjct:    6 MNWAWEQRLPPNSKLILMALADAADEVGQCWPRVRLIAEKCCTSERTVQRILKELETAGFLHIERNYRKDGSQSSNVYSLSL 87          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93551.21609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1YIZ2_9GAMM2.000e-4765.32Helix-turn-helix domain-containing protein n=1 Tax... [more]
A0A7C5Q9X1_9GAMM7.860e-3958.06Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A7C5N341_9HYPH1.580e-2549.19Helix-turn-helix domain-containing protein n=1 Tax... [more]
A0A239B703_9PROT3.080e-2455.43Helix-turn-helix domain-containing protein n=2 Tax... [more]
UPI0010E260F63.570e-2451.89helix-turn-helix domain-containing protein n=1 Tax... [more]
UPI001673B1404.160e-2450.43helix-turn-helix domain-containing protein n=6 Tax... [more]
UPI001FD262B41.950e-2350.00helix-turn-helix domain-containing protein n=2 Tax... [more]
A0A6A7ZJD6_9PSED3.090e-2350.54Uncharacterized protein n=1 Tax=Pseudomonas heller... [more]
K0M9H0_BORPB3.680e-2359.34Uncharacterized protein n=11 Tax=Proteobacteria Ta... [more]
UPI000D004D211.000e-2260.98helix-turn-helix domain-containing protein n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 4..83
e-value: 1.1E-16
score: 62.6
NoneNo IPR availablePFAMPF13730HTH_36coord: 8..61
e-value: 7.8E-16
score: 57.8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.577
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 9..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93551contigM-pyrifera_M_contig93551:313..684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93551.21609.1mRNA_M-pyrifera_M_contig93551.21609.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93551 29..684 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93551.21609.1 ID=prot_M-pyrifera_M_contig93551.21609.1|Name=mRNA_M-pyrifera_M_contig93551.21609.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
MNWAWQRRLSPNLKLILMALSDAADDDGVCWPSVSTIAKKCNVSTRTVRR
GLQSLIESGLLDSEPRYRNDGSNSSNRYRLQLGGGDNLSPTPDSGDRPPG
HVCQGPPDTRVTPRTTTGIQNESP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf