prot_M-pyrifera_M_contig9348.21588.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig9348.21588.1
Unique Name	prot_M-pyrifera_M_contig9348.21588.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	90

Homology

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BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Match: D7FY71_ECTSI (DNA topoisomerase VI subunit A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY71_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 2.830e-54
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0

Query:    1 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 90
            MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN
Sbjct:  476 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 565

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BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Match: A0A6H5KKC7_9PHAE (TP6A_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC7_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 1.640e-53
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0

Query:    1 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 90
            MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN
Sbjct:  646 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 735

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BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Match: A0A7S0GDF4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GDF4_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.940e-53
Identity = 80/90 (88.89%), Postives = 86/90 (95.56%), Query Frame = 0

Query:    1 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 90
            MAEDRFY KYPCI+ITAKGQPDVATR+FL RLK EL IP++GLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLG+RPSDLDRY+
Sbjct:   37 MAEDRFYHKYPCIIITAKGQPDVATRMFLSRLKSELKIPILGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLDRYD 126

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BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Match: A0A7S0ZD75_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZD75_9RHOD)

HSP 1 Score: 170 bits (430), Expect = 3.840e-52
Identity = 78/89 (87.64%), Postives = 86/89 (96.63%), Query Frame = 0

Query:    1 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRY 89
            ++EDRFY KYPCI+ITAKGQPDVATRLFLKRLK+ L IP++GLVDSDPYGLKILSVYMSGSKNMSYDSA+LTTPDIKWLGVRPSDLD+Y
Sbjct:   24 LSEDRFYNKYPCIIITAKGQPDVATRLFLKRLKQTLQIPILGLVDSDPYGLKILSVYMSGSKNMSYDSANLTTPDIKWLGVRPSDLDKY 112

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BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Match: A0A7S3A416_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A416_9RHOD)

HSP 1 Score: 167 bits (423), Expect = 1.090e-51
Identity = 76/90 (84.44%), Postives = 86/90 (95.56%), Query Frame = 0

Query:    1 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 90
            +AEDRFY KYPCI+ITAKGQPDVATR+FLK+L+  L IP++GLVDSDPYGLKILSVYMSGSK+MSYDSA+LTTPDIKWLGVRPSDLD+YN
Sbjct:   21 LAEDRFYNKYPCIIITAKGQPDVATRMFLKKLRYTLRIPILGLVDSDPYGLKILSVYMSGSKSMSYDSANLTTPDIKWLGVRPSDLDKYN 110

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BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Match: A0A7S3A2U5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A2U5_9RHOD)

HSP 1 Score: 167 bits (423), Expect = 4.050e-51
Identity = 76/90 (84.44%), Postives = 86/90 (95.56%), Query Frame = 0

Query:    1 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 90
            +AEDRFY KYPCI+ITAKGQPDVATR+FLK+L+  L IP++GLVDSDPYGLKILSVYMSGSK+MSYDSA+LTTPDIKWLGVRPSDLD+YN
Sbjct:   21 LAEDRFYNKYPCIIITAKGQPDVATRMFLKKLRYTLRIPILGLVDSDPYGLKILSVYMSGSKSMSYDSANLTTPDIKWLGVRPSDLDKYN 110

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BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Match: A0A7S0AGI7_9STRA (Hypothetical protein n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A7S0AGI7_9STRA)

HSP 1 Score: 167 bits (423), Expect = 6.610e-51
Identity = 77/90 (85.56%), Postives = 85/90 (94.44%), Query Frame = 0

Query:    1 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 90
            MAEDRFY KYPCI+ITAKGQPDVA+R+FL R+  EL IPV+GLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLG+RPSDLD+Y+
Sbjct:   37 MAEDRFYHKYPCIIITAKGQPDVASRMFLSRITSELKIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLDKYD 126

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BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Match: A0A1Z5JKS0_FISSO (Meiotic recombination protein SPO11 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKS0_FISSO)

HSP 1 Score: 172 bits (437), Expect = 1.500e-50
Identity = 79/90 (87.78%), Postives = 87/90 (96.67%), Query Frame = 0

Query:    1 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 90
            MAEDRFY +YPCI+ITAKGQPD+ATR+FLKRLK EL IPV+GLVDSDPYGLKILSVYMSGSKNMSYDS+SLTTPDIKWLG+RPSDLDRY+
Sbjct:  266 MAEDRFYHRYPCIIITAKGQPDIATRMFLKRLKEELKIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSSSLTTPDIKWLGLRPSDLDRYD 355

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BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Match: A0A5J4YXA0_PORPP (DNA topoisomerase 6 subunit A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXA0_PORPP)

HSP 1 Score: 172 bits (435), Expect = 2.560e-50
Identity = 80/90 (88.89%), Postives = 86/90 (95.56%), Query Frame = 0

Query:    1 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 90
            +AEDRFY + PCI+ITAKGQPDVATRLFLKRLK  LNIP++GLVDSDPYGLKILSVYMSGSKNMSYDSA+LTTPDIKWLGVRPSDLDRYN
Sbjct:  246 LAEDRFYNRCPCIIITAKGQPDVATRLFLKRLKNTLNIPILGLVDSDPYGLKILSVYMSGSKNMSYDSANLTTPDIKWLGVRPSDLDRYN 335

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BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Match: A0A7S2EAC6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAC6_TRICV)

HSP 1 Score: 166 bits (421), Expect = 5.640e-50
Identity = 76/90 (84.44%), Postives = 85/90 (94.44%), Query Frame = 0

Query:    1 MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN 90
            +AEDRFY +YPC+VITAKGQPDVATR+FL RL  EL IPV+GLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKW+G+RPSDLD+Y+
Sbjct:   86 LAEDRFYHRYPCVVITAKGQPDVATRMFLSRLTSELQIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWIGLRPSDLDKYD 175

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig9348.21588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FY71_ECTSI	2.830e-54	100.00	DNA topoisomerase VI subunit A n=1 Tax=Ectocarpus ...	[more]
A0A6H5KKC7_9PHAE	1.640e-53	100.00	TP6A_N domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A7S0GDF4_9STRA	4.940e-53	88.89	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A7S0ZD75_9RHOD	3.840e-52	87.64	Hypothetical protein n=1 Tax=Timspurckia oligopyre...	[more]
A0A7S3A416_9RHOD	1.090e-51	84.44	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A7S3A2U5_9RHOD	4.050e-51	84.44	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A7S0AGI7_9STRA	6.610e-51	85.56	Hypothetical protein n=2 Tax=Mediophyceae TaxID=58...	[more]
A0A1Z5JKS0_FISSO	1.500e-50	87.78	Meiotic recombination protein SPO11 n=2 Tax=Fistul...	[more]
A0A5J4YXA0_PORPP	2.560e-50	88.89	DNA topoisomerase 6 subunit A n=1 Tax=Porphyridium...	[more]
A0A7S2EAC6_TRICV	5.640e-50	84.44	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002815	Spo11/DNA topoisomerase VI subunit A	PRINTS	PR01550	TOP6AFAMILY	coord: 45..61 score: 54.41 coord: 13..34 score: 51.14
IPR002815	Spo11/DNA topoisomerase VI subunit A	PANTHER	PTHR10848	MEIOTIC RECOMBINATION PROTEIN SPO11	coord: 1..90
None	No IPR available	GENE3D	3.40.1360.10		coord: 1..90 e-value: 7.4E-41 score: 142.0
None	No IPR available	PANTHER	PTHR10848:SF4	DNA TOPOISOMERASE 6 SUBUNIT A	coord: 1..90
IPR036078	Spo11/DNA topoisomerase VI subunit A superfamily	SUPERFAMILY	56726	DNA topoisomerase IV, alpha subunit	coord: 2..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig9348	contig	M-pyrifera_M_contig9348:2658..4003 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig9348.21588.1	mRNA_M-pyrifera_M_contig9348.21588.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig9348 2658..4003 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig9348.21588.1 ID=prot_M-pyrifera_M_contig9348.21588.1|Name=mRNA_M-pyrifera_M_contig9348.21588.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
MAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYG
LKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYN

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002815	Spo11/TopoVI_A
IPR036078	Spo11/TopoVI_A_sf