prot_M-pyrifera_M_contig93467.21584.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93467.21584.1
Unique Nameprot_M-pyrifera_M_contig93467.21584.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length248
Homology
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BLAST of mRNA_M-pyrifera_M_contig93467.21584.1 vs. uniprot
Match: A0A1I8BEE2_MELHA (Uncharacterized protein n=4 Tax=Meloidogyne TaxID=189290 RepID=A0A1I8BEE2_MELHA)

HSP 1 Score: 74.3 bits (181), Expect = 1.580e-11
Identity = 65/215 (30.23%), Postives = 116/215 (53.95%), Query Frame = 0 
Query:   14 LAKKVKVFHELLTEMKVTQFTMWDSIVTKLAKDERFSLLPTMGARKEAFEAYARGRATARKVEKAQAAKALAA----LVEEA-VKKEDILEVKEFEKRYGQDERLKKYSSLSAKEIKEAFEKVAGPIREARRKEKNVDRAEGRHIYVGLLQECEWIRHDSHWSDVRRRLRRDSARYSRCGLASEEKEDLFYDHLKRL-QKARERERKLRNLEDEA 222
            L +++K F +LL + KV+  + W+  ++K+  D+R+ LL  +  RK AF+AY R RA   K EK + AK   A    L+EEA +  +          ++ +D R K    +  +E    F+     + +  ++EK  +R + +  +V LL+E E++R +S W+ V+++L +D  RY    L SE ++ LF +H+K   +   E E + + +E+EA
Sbjct:  297 LEERIKQFRQLLEDKKVSATSTWEKELSKIVFDQRYLLLSAV-ERKAAFDAYCRERAEIEKEEKRKKAKEAKAEFYKLLEEAKLHGKSTFSSFSTNSKWAKDSRFKAVEKVRDREA--YFKDFVEQLYKKEKEEKRKEREKAKECFVALLKEQEYLRRNSVWAVVKKKLDKDE-RYRNKNLDSETRQKLFDEHVKTCPEPTEEEEAEAKRVEEEA 507
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BLAST of mRNA_M-pyrifera_M_contig93467.21584.1 vs. uniprot
Match: A0A6V7WY88_9BILA (40S ribosomal protein S21 n=3 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7WY88_9BILA)

HSP 1 Score: 74.3 bits (181), Expect = 1.710e-11
Identity = 65/215 (30.23%), Postives = 116/215 (53.95%), Query Frame = 0 
Query:   14 LAKKVKVFHELLTEMKVTQFTMWDSIVTKLAKDERFSLLPTMGARKEAFEAYARGRATARKVEKAQAAKALAA----LVEEA-VKKEDILEVKEFEKRYGQDERLKKYSSLSAKEIKEAFEKVAGPIREARRKEKNVDRAEGRHIYVGLLQECEWIRHDSHWSDVRRRLRRDSARYSRCGLASEEKEDLFYDHLKRL-QKARERERKLRNLEDEA 222
            L +++K F +LL + KV+  + W+  ++K+  D+R+ LL  +  RK AF+AY R RA   K EK + AK   A    L++EA +  +          ++ +D+R K    +  KE    F+     + +  ++EK  +R + +  +V LL+E E++R +S W+ V++++ +D  RY    L SE ++ LF +H K   +   E E + + LE+EA
Sbjct:  568 LEERIKQFRQLLEDKKVSATSTWEKELSKIVFDQRYLLLSAV-ERKAAFDAYCRERAEIEKEEKRKKAKEAKAEFYKLLDEAKLHGKSTFSSFSTNSKWAKDQRFKAVEKVRDKEA--YFKDFVEQLYKKEKEEKRKERDKAKECFVALLKEQEYLRRNSVWAVVKKKIDKDE-RYRNKNLDSETRQKLFDEHAKTCPEPTEEEEAEAKRLEEEA 778
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93467.21584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1I8BEE2_MELHA1.580e-1130.23Uncharacterized protein n=4 Tax=Meloidogyne TaxID=... [more]
A0A6V7WY88_9BILA1.710e-1130.2340S ribosomal protein S21 n=3 Tax=Meloidogyne ente... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 205..232
NoneNo IPR availablePANTHERPTHR15377TRANSCRIPTION FACTOR CA150B RELATEDTCERG1coord: 5..247
NoneNo IPR availablePANTHERPTHR15377:SF3TRANSCRIPTION ELONGATION REGULATOR HOMOLOGcoord: 5..247
IPR002713FF domainSMARTSM00441FF_2coord: 14..68
e-value: 0.28
score: 20.2
coord: 147..204
e-value: 0.069
score: 22.3
IPR002713FF domainPFAMPF01846FFcoord: 19..65
e-value: 8.9E-10
score: 38.6
coord: 154..201
e-value: 6.0E-8
score: 32.8
IPR036517FF domain superfamilyGENE3D1.10.10.440coord: 132..216
e-value: 1.7E-10
score: 43.0
IPR036517FF domain superfamilyGENE3D1.10.10.440coord: 1..81
e-value: 1.2E-13
score: 52.8
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 5..68
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 140..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93467contigM-pyrifera_M_contig93467:1..744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93467.21584.1mRNA_M-pyrifera_M_contig93467.21584.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93467 1..744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93467.21584.1 ID=prot_M-pyrifera_M_contig93467.21584.1|Name=mRNA_M-pyrifera_M_contig93467.21584.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp
AAKKEREKEEKRELAKKVKVFHELLTEMKVTQFTMWDSIVTKLAKDERFS
LLPTMGARKEAFEAYARGRATARKVEKAQAAKALAALVEEAVKKEDILEV
KEFEKRYGQDERLKKYSSLSAKEIKEAFEKVAGPIREARRKEKNVDRAEG
RHIYVGLLQECEWIRHDSHWSDVRRRLRRDSARYSRCGLASEEKEDLFYD
HLKRLQKARERERKLRNLEDEARRRRERESRELEHRRRVRERTEAIEN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002713FF_domain
IPR036517FF_domain_sf