prot_M-pyrifera_M_contig93405.21568.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93405.21568.1
Unique Nameprot_M-pyrifera_M_contig93405.21568.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length109
Homology
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BLAST of mRNA_M-pyrifera_M_contig93405.21568.1 vs. uniprot
Match: A0A7X7F1B7_9BACT (ABC transporter permease subunit n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7F1B7_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 7.070e-5
Identity = 29/94 (30.85%), Postives = 54/94 (57.45%), Query Frame = 0 
Query:    4 LLWKDWRLSRTVLLAGIITLVLPYAIPVWVQWRGEGALEA-FAVATTQTLWLSCIVFAIWGGYIVSAERASQTDRFLQSLPIRNTSITGSRLLL 96
            L+WK++RL+R +L AG+  L+LP+AI +    R  G     F  +   + +++ ++ A+ GG  ++ ER  ++  FL +LP+       S+L+L
Sbjct:    4 LIWKEYRLNRLILGAGLFLLLLPHAIALVNGLRHLGNWSHYFEQSMMFSFYVTHVILALLGGNSIAGERGDRSAEFLATLPLSRRRNLASKLVL 97
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93405.21568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7X7F1B7_9BACT7.070e-530.85ABC transporter permease subunit n=1 Tax=Pirellula... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 108..109
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 89..107
NoneNo IPR availableTMHMMTMhelixcoord: 50..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93405contigM-pyrifera_M_contig93405:170..496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93405.21568.1mRNA_M-pyrifera_M_contig93405.21568.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93405 170..496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93405.21568.1 ID=prot_M-pyrifera_M_contig93405.21568.1|Name=mRNA_M-pyrifera_M_contig93405.21568.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
LRALLWKDWRLSRTVLLAGIITLVLPYAIPVWVQWRGEGALEAFAVATTQ
TLWLSCIVFAIWGGYIVSAERASQTDRFLQSLPIRNTSITGSRLLLTFVP
ALIIFLANI
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