prot_M-pyrifera_M_contig93394.21563.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93394.21563.1
Unique Nameprot_M-pyrifera_M_contig93394.21563.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length239
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93394.21563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 56..89
e-value: 0.35
score: 19.9
coord: 16..49
e-value: 15.0
score: 13.4
coord: 97..130
e-value: 230.0
score: 3.0
coord: 174..207
e-value: 350.0
score: 1.3
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 16..47
e-value: 0.18
score: 12.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..239
e-value: 1.5E-26
score: 95.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 139..239
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 10..160
NoneNo IPR availablePANTHERPTHR46630FAMILY NOT NAMEDcoord: 148..239
coord: 7..121
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..239
score: 14.01

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93394contigM-pyrifera_M_contig93394:1..717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93394.21563.1mRNA_M-pyrifera_M_contig93394.21563.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93394 1..717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93394.21563.1 ID=prot_M-pyrifera_M_contig93394.21563.1|Name=mRNA_M-pyrifera_M_contig93394.21563.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=239bp
SFNQALTRATNHAEIADCYQKLAYTYIQTASIDKAIIYGHKALQAARATK
DAGRIAGAYSKLGTAHKQNDELRLAATYYLKALNQVKGNKEYETWMPTMY
NNLGLLFKAMHIYDSAAYYLNASMADLKKFGFKQSYDYVAINLVNLYNKQ
GNYKQAIDLLGSLDHNTPNQRMQVELLAEGGRALIGLGSIDDALPKLTRA
KTIAQELSLTDHLIELDQSISDLYKLRGDYKSALLYFEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom