prot_M-pyrifera_M_contig93319.21551.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig93319.21551.1
Unique Name	prot_M-pyrifera_M_contig93319.21551.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	81

Homology

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BLAST of mRNA_M-pyrifera_M_contig93319.21551.1 vs. uniprot
Match: A0A1M5CRY8_9BACT (Uncharacterized protein n=1 Tax=Cnuella takakiae TaxID=1302690 RepID=A0A1M5CRY8_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 3.810e-9
Identity = 32/75 (42.67%), Postives = 51/75 (68.00%), Query Frame = 0

Query:   16 NFKDEIARIISLYVPIATGVLGVVGLILVGIFIYK-----CEYDKAVDT----LKYVFTALLPIWGTWIGTVLAF 81
            + KD +AR I++YV + TGVLG +G+ LV + +++      E D+ VD     L++VF ++LP+ GTW+GT+LAF
Sbjct:    6 DIKDLLARKITMYVLVCTGVLGTLGIALVLVVLFRKGDTAAETDQMVDNGLKVLQFVFASILPLLGTWLGTILAF 80

[Close]

BLAST of mRNA_M-pyrifera_M_contig93319.21551.1 vs. uniprot
Match: A0A5B8UKV0_9BACT (Uncharacterized protein n=1 Tax=Flavisolibacter ginsenosidimutans TaxID=661481 RepID=A0A5B8UKV0_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 1.040e-6
Identity = 31/77 (40.26%), Postives = 51/77 (66.23%), Query Frame = 0

Query:    8 NTEATTNGN-FKDEIARIISLYVPIATGVLGVVGLIL--VGIFIYKCEYDKAVDTLKYVFTALLPIWGTWIGTVLAF 81
            N  AT   N  ++++AR +S+ V + T VLGV+G+ +  V +   K +   A D L+ +F+A+LP++GTWIGT+LA+
Sbjct:    6 NNPATQTANPVQEKVARTVSIIVLVGTCVLGVLGMAIAIVALTTKKEDIAGAKDILQILFSAILPLFGTWIGTILAY 82

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig93319.21551.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig93319.21551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A1M5CRY8_9BACT	3.810e-9	42.67	Uncharacterized protein n=1 Tax=Cnuella takakiae T...	[more]
A0A5B8UKV0_9BACT	1.040e-6	40.26	Uncharacterized protein n=1 Tax=Flavisolibacter gi...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 81..81
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 27..48
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 60..80
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..59
None	No IPR available	TMHMM	TMhelix		coord: 62..80
None	No IPR available	TMHMM	TMhelix		coord: 27..49

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig93319	contig	M-pyrifera_M_contig93319:513..755 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig93319.21551.1	mRNA_M-pyrifera_M_contig93319.21551.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig93319 513..755 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig93319.21551.1 ID=prot_M-pyrifera_M_contig93319.21551.1|Name=mRNA_M-pyrifera_M_contig93319.21551.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp
MSNPTPPNTEATTNGNFKDEIARIISLYVPIATGVLGVVGLILVGIFIYK
CEYDKAVDTLKYVFTALLPIWGTWIGTVLAF