prot_M-pyrifera_M_contig93293.21540.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig93293.21540.1
Unique Name	prot_M-pyrifera_M_contig93293.21540.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	251

Homology

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BLAST of mRNA_M-pyrifera_M_contig93293.21540.1 vs. uniprot
Match: A0A0L0DDZ8_THETB (Translocon-associated protein subunit delta n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DDZ8_THETB)

HSP 1 Score: 144 bits (362), Expect = 1.860e-35
Identity = 92/265 (34.72%), Postives = 144/265 (54.34%), Query Frame = 0

Query:    1 ANGESIVLQNYDSAEGQLYDDAEPVAVSVQTDLHLADVVEQPKGGDFFYGNVISFQFEVKDHVSGEYVSAGERGNA----------YMVLTHTDAELGGRTFTSVKVPAEEGDGSS-FVINWEINPNAVNGASTLQLVAEDADENQVELLEESGKNAVQLQVNIGGDLDIESSTYSSTDFFTSHTAHIVSFTMECQGKALKDAKLRSSV--IYGGAA--VYDAPVSY--DEEGYSISWTTDHRASPSGTYTVRVFRETDQSKAEE 248
            A G ++ L NYDSAE  L++DA P++V+V   L ++     P   DF+YGNV+ F+F V D +SG+ +SA +  +A          Y+V++H DA   GR F SV+  A   D +  F I+W INPNAV G   L++ A DA   Q+ + + + +N V+  + IGG++ + S  YS        T  +  F++ CQGK L +A+LR SV  +  GA   ++  PV+     + Y +S+        +G Y +  +RE D+ +A E
Sbjct:  658 AAGNAVELDNYDSAEAALWEDASPLSVAVPVHLEMSSAEGAPTKKDFYYGNVVEFEFTVVDTLSGKSLSAADVASAVADDAVAPGMYLVISHDDAVRAGRRFVSVRERATARDAADGFAISWTINPNAVQGDGILEVAAYDAAGTQLPVYKPNSENKVEYPIVIGGEIKVTSEPYSFDAERRDTTVFVSEFSLGCQGKKLANAQLRCSVFKVVDGAKAELFQVPVALGASNDAYQVSFAVP-TPDAAGDYELAFYREVDRVRAAE 921

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig93293.21540.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig93293.21540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A0L0DDZ8_THETB	1.860e-35	34.72	Translocon-associated protein subunit delta n=1 Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008855	Translocon-associated	PFAM	PF05404	TRAP-delta	coord: 158..248 e-value: 1.7E-13 score: 50.5

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig93293	contig	M-pyrifera_M_contig93293:1..753 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig93293.21540.1	mRNA_M-pyrifera_M_contig93293.21540.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig93293 1..753 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig93293.21540.1 ID=prot_M-pyrifera_M_contig93293.21540.1|Name=mRNA_M-pyrifera_M_contig93293.21540.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=251bp
ANGESIVLQNYDSAEGQLYDDAEPVAVSVQTDLHLADVVEQPKGGDFFYG
NVISFQFEVKDHVSGEYVSAGERGNAYMVLTHTDAELGGRTFTSVKVPAE
EGDGSSFVINWEINPNAVNGASTLQLVAEDADENQVELLEESGKNAVQLQ
VNIGGDLDIESSTYSSTDFFTSHTAHIVSFTMECQGKALKDAKLRSSVIY
GGAAVYDAPVSYDEEGYSISWTTDHRASPSGTYTVRVFRETDQSKAEENE
E

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008855	TRAP-delta