prot_M-pyrifera_M_contig93228.21530.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93228.21530.1
Unique Nameprot_M-pyrifera_M_contig93228.21530.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length201
Homology
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BLAST of mRNA_M-pyrifera_M_contig93228.21530.1 vs. uniprot
Match: A0A1M4UG36_9FIRM (TPR repeat n=2 Tax=Schwartzia TaxID=55506 RepID=A0A1M4UG36_9FIRM)

HSP 1 Score: 53.5 bits (127), Expect = 7.210e-5
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:    4 AEAARWYRRAAEAGNSGAMLSLGFRYEEGRGVEKD 38
            AEA +WYRRAAEAGN  AM  LG+ YE GRGV+KD
Sbjct:  807 AEAVKWYRRAAEAGNKYAMYDLGYAYEIGRGVKKD 841
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93228.21530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1M4UG36_9FIRM7.210e-571.43TPR repeat n=2 Tax=Schwartzia TaxID=55506 RepID=A0... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 163..198
e-value: 0.0081
score: 25.4
coord: 91..126
e-value: 5.1E-10
score: 49.3
coord: 127..162
e-value: 0.1
score: 21.7
coord: 19..54
e-value: 1.4E-10
score: 51.1
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 165..197
e-value: 2.9E-4
score: 21.4
coord: 20..54
e-value: 4.6E-10
score: 39.8
coord: 91..126
e-value: 1.9E-9
score: 37.9
coord: 2..18
e-value: 0.084
score: 13.6
coord: 128..161
e-value: 1.2E-4
score: 22.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 61..201
e-value: 1.4E-38
score: 135.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..60
e-value: 1.8E-18
score: 69.1
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 74..196
coord: 2..68
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 3..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93228contigM-pyrifera_M_contig93228:22..729 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93228.21530.1mRNA_M-pyrifera_M_contig93228.21530.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93228 22..756 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93228.21530.1 ID=prot_M-pyrifera_M_contig93228.21530.1|Name=mRNA_M-pyrifera_M_contig93228.21530.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp
MDEAEAARWYRRAAEAGNSGAMLSLGFRYEEGRGVEKDESEAVRWYRRAA
EAGNCRGMTYLRACIDRGCAAELDSAEAARCFRSAAGAGHAKSMLNLGAC
YEAGRGVEKDESEAARWYRRAAGAGHATSMLRLSECLRSGTGTPADADEA
ALWLGRAADAGCVQAMVPLGRLLLGGRRIPSDERRAVFWLRKAAEGGREG
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf