prot_M-pyrifera_M_contig93169.21526.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93169.21526.1
Unique Nameprot_M-pyrifera_M_contig93169.21526.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length80
Homology
BLAST of mRNA_M-pyrifera_M_contig93169.21526.1 vs. uniprot
Match: A0A5A8EBP6_CAFRO (Ubiquitin-like domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EBP6_CAFRO)

HSP 1 Score: 75.5 bits (184), Expect = 1.810e-14
Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    2 EFWSTRTSGARERWDALKLACESLLQEPPDVGLAGEVLSAADLRCP-TGNLAEVYDARGRLYAVPRYCYQTPANVMSTE 79
            +FWSTRT    + W+AL L  ++LLQ   D GLA  +L  + LR      L+EV+D RG+LY VPRYC+QTP NV S +
Sbjct:   76 QFWSTRTENQPQAWEALHLCADTLLQG--DAGLAHTILVESGLRVGGRAGLSEVWDPRGQLYRVPRYCWQTPGNVASDD 152          
BLAST of mRNA_M-pyrifera_M_contig93169.21526.1 vs. uniprot
Match: A0A8H4W4U4_9HELO (Ubiquitin-like domain-containing protein n=1 Tax=Cudoniella acicularis TaxID=354080 RepID=A0A8H4W4U4_9HELO)

HSP 1 Score: 52.4 bits (124), Expect = 5.170e-6
Identity = 33/86 (38.37%), Postives = 47/86 (54.65%), Query Frame = 0
Query:    3 FWSTRTSGARERWDALKLACESLLQ--EPPD----VGLAGEVLSAADLRCPTGNLAE--VYDARGRLYAVPRYCYQTPANVMSTED 80
            F+ TRT+G  E W  L+ A E L    EP D    VG A ++L AAD+  PTG+LA    +DA G  Y +P      P N++++ +
Sbjct:  143 FFDTRTAGRTEIWQTLRAALEILWAGGEPEDHDGGVGTAQQILDAADITIPTGDLAVGGAFDAFGVHYKMPPEIVSDPENIVASPE 228          
BLAST of mRNA_M-pyrifera_M_contig93169.21526.1 vs. uniprot
Match: A0A2J6SD51_9HELO (Ubiquitin-like domain-containing protein n=2 Tax=Hyaloscypha hepaticicola/Rhizoscyphus ericae species complex TaxID=186449 RepID=A0A2J6SD51_9HELO)

HSP 1 Score: 51.6 bits (122), Expect = 8.880e-6
Identity = 29/82 (35.37%), Postives = 43/82 (52.44%), Query Frame = 0
Query:    2 EFWSTRTSGARERWDALKLACESLLQEPPD------VGLAGEVLSAADLRCPTGNLAE--VYDARGRLYAVPRYCYQTPANV 75
            EF+ TR +G  E W  ++   E L     +      +G A ++L AAD+  PTG+LA   VYD+ G  Y++P Y    P N+
Sbjct:   89 EFFDTRVTGRSEVWQTVQQVLELLWSGGDEGDTDGGLGTAQQILDAADITIPTGDLATGGVYDSLGAHYSLPEYIVSDPQNI 170          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93169.21526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A5A8EBP6_CAFRO1.810e-1449.37Ubiquitin-like domain-containing protein n=1 Tax=C... [more]
A0A8H4W4U4_9HELO5.170e-638.37Ubiquitin-like domain-containing protein n=1 Tax=C... [more]
A0A2J6SD51_9HELO8.880e-635.37Ubiquitin-like domain-containing protein n=2 Tax=H... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032752DC-UbP/UBTD2, N-terminal domainPFAMPF16455UBDcoord: 1..77
e-value: 1.1E-20
score: 73.8
IPR038169DC-UbP/UBTD2, N-terminal domain superfamilyGENE3D1.20.225.20coord: 1..69
e-value: 1.3E-18
score: 69.0
NoneNo IPR availablePANTHERPTHR13609:SF4F12M16.29coord: 1..78
IPR039869Ubiquitin domain-containing protein 1/2PANTHERPTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDcoord: 1..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93169contigM-pyrifera_M_contig93169:314..553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93169.21526.1mRNA_M-pyrifera_M_contig93169.21526.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93169 314..553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93169.21526.1 ID=prot_M-pyrifera_M_contig93169.21526.1|Name=mRNA_M-pyrifera_M_contig93169.21526.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp
QEFWSTRTSGARERWDALKLACESLLQEPPDVGLAGEVLSAADLRCPTGN
LAEVYDARGRLYAVPRYCYQTPANVMSTED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032752DC-UbP/UBTD2_N
IPR038169DC-UbP/UBTD2_N_sf
IPR039869UBTD1/2