prot_M-pyrifera_M_contig93063.21507.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93063.21507.1
Unique Nameprot_M-pyrifera_M_contig93063.21507.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length95
Homology
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BLAST of mRNA_M-pyrifera_M_contig93063.21507.1 vs. uniprot
Match: UPI0015D0CC2D (E3 ubiquitin-protein ligase TRIM47-like n=1 Tax=Electrophorus electricus TaxID=8005 RepID=UPI0015D0CC2D)

HSP 1 Score: 52.0 bits (123), Expect = 1.240e-5
Identity = 25/63 (39.68%), Postives = 34/63 (53.97%), Query Frame = 0 
Query:   43 NRLHSHSTDS-------HFTQ---RPPTVVHVDAICDGCGMFPLVGPRFQCRERPDVVLCVAC 95
            N++ +H  +S       H TQ   +P   VH   ICDGC MFP++GPRF+C +  D   C  C
Sbjct:  350 NKIITHGDESVELQDPGHQTQAMPQPHPNVHPTIICDGCNMFPMIGPRFKCLDCNDFDFCEIC 412
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BLAST of mRNA_M-pyrifera_M_contig93063.21507.1 vs. uniprot
Match: A0A835PND7_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835PND7_VANPL)

HSP 1 Score: 49.7 bits (117), Expect = 8.430e-5
Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 0 
Query:   37 AGAWGDNRL-HSHSTDSHFTQRPPTVVHVDAICDGCGMFPLVGPRFQCRERPDVVLCVAC 95
            A A+  +RL H +     +  R     H   ICDGCGM P++GPR++   + +  LC+AC
Sbjct:  289 ANAFRGHRLQHPYGRFCSYDGRTSRAFHRGVICDGCGMHPIMGPRYKSTVKDNYDLCIAC 348
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BLAST of mRNA_M-pyrifera_M_contig93063.21507.1 vs. uniprot
Match: A0A7S3DZD4_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3DZD4_9CHLO)

HSP 1 Score: 48.9 bits (115), Expect = 9.020e-5
Identity = 22/44 (50.00%), Postives = 26/44 (59.09%), Query Frame = 0 
Query:   55 TQRPPTVVHVDAICDGCGMFPLVGPRFQC---RERPDVVLCVAC 95
            T RP   VH    CDGCG+ P+VGPR+QC   +ER    LC  C
Sbjct:   58 TIRPENFVHFGVGCDGCGVCPIVGPRWQCTECKERIGFDLCAEC 101
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93063.21507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI0015D0CC2D1.240e-539.68E3 ubiquitin-protein ligase TRIM47-like n=1 Tax=El... [more]
A0A835PND7_VANPL8.430e-536.67Uncharacterized protein n=2 Tax=Vanilla planifolia... [more]
A0A7S3DZD4_9CHLO9.020e-550.00Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.90coord: 56..95
e-value: 6.3E-8
score: 34.0
coord: 1..55
e-value: 6.9E-8
score: 33.9
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 55..95
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..56
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 63..95
e-value: 5.5E-5
score: 22.9
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 1..48
score: 8.686
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 62..95
score: 10.317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93063contigM-pyrifera_M_contig93063:394..678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93063.21507.1mRNA_M-pyrifera_M_contig93063.21507.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93063 394..678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93063.21507.1 ID=prot_M-pyrifera_M_contig93063.21507.1|Name=mRNA_M-pyrifera_M_contig93063.21507.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp
HYGVTCSACRSSPIVGVCHLCRAVDCDVRLCDTCFRAGAWGDNRLHSHST
DSHFTQRPPTVVHVDAICDGCGMFPLVGPRFQCRERPDVVLCVAC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ