prot_M-pyrifera_M_contig93008.21496.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93008.21496.1
Unique Nameprot_M-pyrifera_M_contig93008.21496.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Match: A0A0E9NJS6_SAICN (PRP1_N domain-containing protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NJS6_SAICN)

HSP 1 Score: 79.7 bits (195), Expect = 6.920e-15
Identity = 47/112 (41.96%), Postives = 68/112 (60.71%), Query Frame = 0
Query:    1 RGVREVGSRGAEIGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAEDRVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAAAELEKEQGNGEAFEAVLKEG 112
            R + E+   GA + R +WL+ A + +     +TA+A+V +T   GL  EDR   W+ +A  L   G  A ARA++  ALRV P++ +LWR AAELEK  G  EA EA+L++G
Sbjct:  466 RAIMELQKEGAALEREQWLAEAEKCDSEGDVVTAQAIVNQTLGQGLEDEDREAQWMDDATALVSRGRFATARAVYAYALRVYPEEDSLWRKAAELEKNHGTREAMEAILEKG 577          
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Match: A0A8H3TN05_9TREE (PRP1_N domain-containing protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TN05_9TREE)

HSP 1 Score: 69.7 bits (169), Expect = 2.210e-11
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0
Query:   13 IGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAEDRVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAAAELEKEQGNGEAFEAVL 109
            + R +W+  A   E   SP+TA+A+++ T  L +  EDR+ TW+ +AE   +     CAR ++   ++V P    +WRAAA+ EK+ G  EA + +L
Sbjct:  479 MSREQWMKEAERCETEGSPITAQAILKATLHLDIEEEDRLDTWLDDAESAAKRNFIECARGIYAYVIKVFPTKKAVWRAAADFEKQHGTSEALQELL 575          
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Match: A0A1C7LXR5_GRIFR (Pre-mRNA-processing factor 6 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7LXR5_GRIFR)

HSP 1 Score: 66.2 bits (160), Expect = 3.620e-10
Identity = 41/105 (39.05%), Postives = 53/105 (50.48%), Query Frame = 0
Query:    2 GVREVGSRGAEIGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAEDRVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAAAELEKEQGNGEAFE 106
            GVRE+      + R +WL  A   E   SP T  A+V+ T  + +  EDR+ TWV +AE          ARA+   ALRV P    LWR AA LEK  G  E+ +
Sbjct:  473 GVRELRRHQVLLTREQWLKEAERCENEGSPRTCEAIVKATVAMDIEEEDRLDTWVGDAEAAEAKSNVGTARAILAYALRVFPDKKNLWRKAAALEKAHGTRESLD 577          
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Match: A0A316V8H1_9BASI (Putative pre-mRNA splicing factor prp1 n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316V8H1_9BASI)

HSP 1 Score: 66.2 bits (160), Expect = 3.620e-10
Identity = 36/122 (29.51%), Postives = 64/122 (52.46%), Query Frame = 0
Query:    3 VREVGSRGAEIGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAEDRVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAAAELEKEQGNGEAFEAVLKEGMRQSARSPVLWL 124
            ++ +   GA + R +WL  A + +   SP ++ ++V+ T  + +  EDR   WV +A+     G  A ARA+    LR      ++W+ AA+LEK+ GN    + +L++ +    +S  LWL
Sbjct:  475 IKRLTKNGAVLSREQWLKEAEQVDSEGSPRSSASIVKATIAMDIDEEDRQTVWVEDAQACIERGRIATARAILAYTLRHFTDQASIWKIAADLEKQHGNKATLQRLLEKAVSSCPKSEELWL 596          
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Match: G7E6K2_MIXOS (PRP1_N domain-containing protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7E6K2_MIXOS)

HSP 1 Score: 65.9 bits (159), Expect = 4.920e-10
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 0
Query:    2 GVREVGSRGAEIGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAEDRVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAAAELEKEQGNGEAFEA 107
            G + +   G E+ R EW+  A   E   S LTARA+V  T    +  + R+ TWV +A+        A ARA+   ALRV P+   LWR AA+LEK+ G+ E   A
Sbjct:  458 GCQRLRQAGVELSREEWIKEALRCEEDGSLLTARAIVNATIHQDIDEDQRLETWVEDAQSALATSHIATARAMLAYALRVFPQKQALWRRAADLEKKHGSRETLLA 563          
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Match: A0A0C3DZ29_9AGAM (PRP1_N domain-containing protein n=2 Tax=Sclerodermatineae TaxID=227327 RepID=A0A0C3DZ29_9AGAM)

HSP 1 Score: 65.5 bits (158), Expect = 6.730e-10
Identity = 39/105 (37.14%), Postives = 55/105 (52.38%), Query Frame = 0
Query:    2 GVREVGSRGAEIGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAEDRVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAAAELEKEQGNGEAFE 106
            GVRE+      + R +WL  A   E   SP T  A+++ T  + +  EDR+ TWV +AE          ARA+   AL+V P    LWR AA+LEK  G+ E+ +
Sbjct:  475 GVRELRRHQVLLTREQWLKEAERCESESSPRTCEAIIKATVGMEIEEEDRLDTWVTDAESAESRDKVGTARAILAYALKVFPDKRHLWRKAADLEKAHGSRESLD 579          
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Match: A0A4S4LAC1_9AGAM (PRP1_N domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LAC1_9AGAM)

HSP 1 Score: 64.3 bits (155), Expect = 1.710e-9
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = 0
Query:    2 GVREVGSRGAEIGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAEDRVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAAAELEKEQGNGE 103
            GVRE+      + R +WL  A   E   SP T+ A+++ T  + +  EDR+ TWV +AE     G+   ARA+   AL+V P    LW  AA LEK  G  E
Sbjct:  470 GVRELRRHQVLLTREQWLKEAERCESDGSPRTSEAIIKATVGMEIEEEDRLDTWVGDAESAEERGMIGSARAILAYALKVFPDRRMLWEKAAGLEKAHGTRE 571          
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Match: A0A4R0RB93_9APHY (PRP1_N domain-containing protein n=2 Tax=Agaricomycetes TaxID=155619 RepID=A0A4R0RB93_9APHY)

HSP 1 Score: 63.9 bits (154), Expect = 2.330e-9
Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 0
Query:    2 GVREVGSRGAEIGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAEDRVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAAAELEKEQGNGEAFEA 107
            GV ++      + R +WL  A + E   SP T  A+V+ T  + +  EDR+ TWV +AE          ARA+   ALRV P    LWR AA+LE+  G  E+  A
Sbjct:  478 GVGQLRKHQVLLTREQWLKEAEKCEAEGSPRTCEAIVKATVAMEVEEEDRLDTWVGDAESAEARERVGTARAILAYALRVFPDKKMLWRKAADLERTHGTRESLNA 583          
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Match: A0A0D0BDB0_9AGAR (PRP1_N domain-containing protein n=4 Tax=Omphalotaceae TaxID=72117 RepID=A0A0D0BDB0_9AGAR)

HSP 1 Score: 63.9 bits (154), Expect = 2.330e-9
Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 0
Query:    2 GVREVGSRGAEIGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAEDRVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAAAELEKEQGNGEAFEA 107
            GVRE+   G  + R +WL  A + E   S LT+ A+V+ T  + +  EDR+ TW+ +AE      +   AR++   AL+V P    LW  AA LEK  G  ++ +A
Sbjct:  476 GVRELRRHGVLLTREQWLKEAEKCETQGSVLTSEAIVKATIAMDVEEEDRLDTWIDDAEGALSRNMVGTARSVLAYALKVFPDKKNLWIRAAGLEKAHGTSQSLDA 581          
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Match: A0A4S4N0N6_9APHY (Uncharacterized protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4N0N6_9APHY)

HSP 1 Score: 63.2 bits (152), Expect = 4.310e-9
Identity = 36/91 (39.56%), Postives = 49/91 (53.85%), Query Frame = 0
Query:    2 GVREVGSRGAEIGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAEDRVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAA 92
            GV+E+      + R +WL  A   E  +SP T  A+V+ T  + +  EDR+ TWV +AE     G+   ARA+   ALRV P   TLWR A
Sbjct:  526 GVKELRRHQVLLTREQWLKEAERCEAEESPRTCEAIVKATVAMEVEEEDRLDTWVGDAESAEARGMVGTARAILAYALRVFPDRKTLWRKA 616          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93008.21496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0E9NJS6_SAICN6.920e-1541.96PRP1_N domain-containing protein n=1 Tax=Saitoella... [more]
A0A8H3TN05_9TREE2.210e-1135.05PRP1_N domain-containing protein n=1 Tax=Naganishi... [more]
A0A1C7LXR5_GRIFR3.620e-1039.05Pre-mRNA-processing factor 6 n=1 Tax=Grifola frond... [more]
A0A316V8H1_9BASI3.620e-1029.51Putative pre-mRNA splicing factor prp1 n=1 Tax=Mei... [more]
G7E6K2_MIXOS4.920e-1038.68PRP1_N domain-containing protein n=1 Tax=Mixia osm... [more]
A0A0C3DZ29_9AGAM6.730e-1037.14PRP1_N domain-containing protein n=2 Tax=Scleroder... [more]
A0A4S4LAC1_9AGAM1.710e-938.24PRP1_N domain-containing protein n=1 Tax=Phellinid... [more]
A0A4R0RB93_9APHY2.330e-936.79PRP1_N domain-containing protein n=2 Tax=Agaricomy... [more]
A0A0D0BDB0_9AGAR2.330e-935.85PRP1_N domain-containing protein n=4 Tax=Omphalota... [more]
A0A4S4N0N6_9APHY4.310e-939.56Uncharacterized protein (Fragment) n=1 Tax=Antrodi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 16..124
e-value: 5.4E-9
score: 37.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 48..115
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 1..124
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93008contigM-pyrifera_M_contig93008:3..374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93008.21496.1mRNA_M-pyrifera_M_contig93008.21496.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93008 3..374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93008.21496.1 ID=prot_M-pyrifera_M_contig93008.21496.1|Name=mRNA_M-pyrifera_M_contig93008.21496.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
RGVREVGSRGAEIGRGEWLSLAREAEVGQSPLTARAVVEETATLGLAAED
RVRTWVAEAEELRRAGLPACARALFRLALRVTPKDVTLWRAAAELEKEQG
NGEAFEAVLKEGMRQSARSPVLWL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR027108Prp6/Prp1/STA1