prot_M-pyrifera_M_contig92933.21490.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig92933.21490.1
Unique Nameprot_M-pyrifera_M_contig92933.21490.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length246
Homology
BLAST of mRNA_M-pyrifera_M_contig92933.21490.1 vs. uniprot
Match: UPI001EE79793 (SMI1/KNR4 family protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE79793)

HSP 1 Score: 151 bits (381), Expect = 1.270e-41
Identity = 94/239 (39.33%), Postives = 128/239 (53.56%), Query Frame = 0
Query:    1 EQRLSLSLPEPYREALLDGVTIDGSDPAPYILQDVKELLIMNLEVRMALRDDAFCGAPWPTHFLGIGEDGCGNIYCIAANDSACAVQMFDHESNVFEDVTDSLPAYFEYISSIISLLKSTSEDCTGSSVRPEIESTLSPDVVFVARTDVPRESVLDPISMSEWLSLVESDPELELREFRAIVNPFRQEEIRSECPGLAVLESGTSGQEFQFSCGRVMVRCPDPAALQKLKQIAEALDAK 239
            E+RL   LPE Y E +      +     PY+  D+K +LI NL++RM  R  AF G PWP  FL IG DGCGN Y I  +     V  FDHE++ FE V   L  + + ++ + S+      D   +  +P     L  D   +ARTD P ESVL PI++ EW SLVE D +LE  EF    +PF+ EEIR    GLA  +SGT     Q++ GR+  R      ++K+K IA  L+A+
Sbjct:    9 EKRLGFELPEAYCEIVARSERCE-----PYLESDLKRMLIENLQLRMTPRPAAFAGKPWPPSFLCIGNDGCGNNYAIDVDAPQAGVWFFDHEADEFEIVAADLAEFVQQMAPLASI------DYRANGSQP-----LQSDNHVIARTDRPEESVLVPITLEEWKSLVERDDQLEWIEFEERKHPFKAEEIRIPVYGLARFQSGTESANLQWAFGRLWNRRGGLETVEKMKAIASNLEAR 231          
BLAST of mRNA_M-pyrifera_M_contig92933.21490.1 vs. uniprot
Match: A0A853I4Z7_9GAMM (Uncharacterized protein n=1 Tax=Endozoicomonas sp. SM1973 TaxID=2751884 RepID=A0A853I4Z7_9GAMM)

HSP 1 Score: 71.6 bits (174), Expect = 1.760e-11
Identity = 62/211 (29.38%), Postives = 94/211 (44.55%), Query Frame = 0
Query:   34 DVKELLIMNLEVRMALRDDAFCGAPWPTHFLGIGEDGCGNIYCIAANDSACAVQMFDHESNVFEDVTDSLPAYFEYISSIISLLKSTSEDCTGSSVRPEIESTLSPDVVFVARTDVPRESVLDPISMSEWLSLVESDPELELREFRAIVNPFRQEEIRSECPGLAVLESGTSGQEFQFSCGRVMVRCPDPAALQKLK-QIAEALDAKVIKG 243
            DVK L ++NLE+   L +           F  +  DGCGN Y +  N  A  V +  H+    E     L  +          LK+  ++C        I   L    + + RTD+P ES+L+PI + EWL  +E+   +    +R   NPF  E  R + PG AV E+     E+    GRV+    +     +L  ++AE L+A +IKG
Sbjct:   32 DVKTLCVLNLELWSNLNESEI-----KNRFF-LSGDGCGNYYFVETNRDA-EVFLLSHDPVGIEKTGMVLDQF----------LKNAVQECP-------IMQDLEQGELAICRTDIPGESILNPIMLDEWLQAIENVQGINHLGYREGKNPFTGEVHRFDIPGYAVAETS----EYSLCLGRVLTM--ESIGNNELAFKLAEELEANLIKG 212          
BLAST of mRNA_M-pyrifera_M_contig92933.21490.1 vs. uniprot
Match: A0A368W8R8_9BACL (Uncharacterized protein n=1 Tax=Paenibacillus prosopidis TaxID=630520 RepID=A0A368W8R8_9BACL)

HSP 1 Score: 55.5 bits (132), Expect = 2.070e-6
Identity = 34/104 (32.69%), Postives = 56/104 (53.85%), Query Frame = 0
Query:  142 VFVARTDVPRESVLDPISMSEWLSLVESDPELELREFRAIVNPFRQEEIRSECPGLAVLESGTSGQE----FQFSCGRVMVRCPDPAALQKLKQIAEALDAKVI 241
            + + R +   ES   PIS+SEW  ++  DP+L L +   + +P     +R E  G+AV       +E    F +  GR++V+ P+   + K+K+IAE L+A VI
Sbjct:    5 IHITRAEWWGESEDHPISLSEWQEIINGDPQLRLEKAAEMKSPNGMT-LRYENQGIAVCIMEDEDEEYPVYFDYRDGRIVVKNPNDQIINKMKEIAEKLNASVI 107          
BLAST of mRNA_M-pyrifera_M_contig92933.21490.1 vs. uniprot
Match: UPI0013699678 (hypothetical protein n=1 Tax=Clostridium sp. C8-1-8 TaxID=2698831 RepID=UPI0013699678)

HSP 1 Score: 52.4 bits (124), Expect = 2.770e-5
Identity = 28/104 (26.92%), Postives = 57/104 (54.81%), Query Frame = 0
Query:  142 VFVARTDVPRESVLDPISMSEWLSLVESDPELELREFRAIVNPFRQEEIRSECPGLAVL----ESGTSGQEFQFSCGRVMVRCPDPAALQKLKQIAEALDAKVI 241
            + + +++ P E+   PI++ EW+SLVE+D E++++     +NP  +E+I  +    AV     E  T    F ++ G++     +   ++K+K+IA  L  +V+
Sbjct:    5 IHIIKSNYPWEASKQPITLEEWISLVEADMEMKMKSEFEDINPITKEKIIIKLENTAVYTYNYEGNTCEVLFTYNRGKISGAYVNDKVIEKMKEIATKLGCRVV 108          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92933.21490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI001EE797931.270e-4139.33SMI1/KNR4 family protein n=1 Tax=Rubinisphaera sp.... [more]
A0A853I4Z7_9GAMM1.760e-1129.38Uncharacterized protein n=1 Tax=Endozoicomonas sp.... [more]
A0A368W8R8_9BACL2.070e-632.69Uncharacterized protein n=1 Tax=Paenibacillus pros... [more]
UPI00136996782.770e-526.92hypothetical protein n=1 Tax=Clostridium sp. C8-1-... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037883Knr4/Smi1-like domain superfamilyGENE3D3.40.1580.10coord: 1..119
e-value: 4.5E-7
score: 31.7
NoneNo IPR availableSUPERFAMILY160631SMI1/KNR4-likecoord: 1..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92933contigM-pyrifera_M_contig92933:21..758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92933.21490.1mRNA_M-pyrifera_M_contig92933.21490.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig92933 21..758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig92933.21490.1 ID=prot_M-pyrifera_M_contig92933.21490.1|Name=mRNA_M-pyrifera_M_contig92933.21490.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
EQRLSLSLPEPYREALLDGVTIDGSDPAPYILQDVKELLIMNLEVRMALR
DDAFCGAPWPTHFLGIGEDGCGNIYCIAANDSACAVQMFDHESNVFEDVT
DSLPAYFEYISSIISLLKSTSEDCTGSSVRPEIESTLSPDVVFVARTDVP
RESVLDPISMSEWLSLVESDPELELREFRAIVNPFRQEEIRSECPGLAVL
ESGTSGQEFQFSCGRVMVRCPDPAALQKLKQIAEALDAKVIKGWQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037883Knr4/Smi1-like_sf