prot_M-pyrifera_M_contig92927.21489.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig92927.21489.1
Unique Nameprot_M-pyrifera_M_contig92927.21489.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length62
Homology
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A5A8DBD9_CAFRO (TM2 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBD9_CAFRO)

HSP 1 Score: 78.6 bits (192), Expect = 3.230e-17
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNAILFQREF 61
            A+ LW  LGIFG HRFY+G W++GLLWM + GL LVGWI DAW + D V E+N   +   F
Sbjct:    9 AYALWLVLGIFGGHRFYLGHWRTGLLWMCTCGLFLVGWITDAWRIPDLVNEHNREAWDHHF 69          
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: UPI001F5BD88F (TM2 domain-containing protein n=2 Tax=Thiococcus pfennigii TaxID=1057 RepID=UPI001F5BD88F)

HSP 1 Score: 78.6 bits (192), Expect = 4.030e-17
Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNA 54
            AW+L  FLG+FG HRFY+G+W +GLLW+ +GGL LVG++ D W L+D ++E NA
Sbjct:   79 AWILLTFLGLFGVHRFYLGKWPTGLLWLLTGGLFLVGYVYDYWTLNDQIDEVNA 132          
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A1A9F6F7_9GAMM (Uncharacterized protein n=3 Tax=Marinobacterium TaxID=48075 RepID=A0A1A9F6F7_9GAMM)

HSP 1 Score: 75.5 bits (184), Expect = 4.740e-16
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNA 54
            AW+L  FLGIFGAHRFY+G+W SGLL++ +GGLLL+G I D W L+D V E N 
Sbjct:   66 AWILLTFLGIFGAHRFYMGKWLSGLLYLLTGGLLLIGVIYDFWTLNDQVSENNG 119          
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A1P8WBM5_9PLAN (TM2 domain-containing protein n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WBM5_9PLAN)

HSP 1 Score: 75.5 bits (184), Expect = 7.140e-16
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNAILFQREFD 62
            AWLL  F+G+FG HR Y+G+W SGL+W+ +GGL LVGW+ D W L++ V E N  L   + D
Sbjct:   78 AWLLLTFVGVFGIHRLYLGKWISGLIWLATGGLFLVGWLYDLWTLNEQVNEENQHLSYHQHD 139          
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A3E0PZE5_9BACT (NINE protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PZE5_9BACT)

HSP 1 Score: 75.5 bits (184), Expect = 7.660e-16
Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYN 53
            AWLL  FLG FG HRFY+G+W +GLLW+ +GGL L+GW+ D W L+  V E N
Sbjct:   86 AWLLLTFLGAFGVHRFYLGKWLTGLLWLVTGGLFLIGWLYDLWTLNGQVSEVN 138          
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A6M0JW12_9GAMM (TM2 domain-containing protein n=1 Tax=Thiorhodococcus minor TaxID=57489 RepID=A0A6M0JW12_9GAMM)

HSP 1 Score: 75.9 bits (185), Expect = 1.090e-15
Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNA 54
            AW+L  FLGIFG HRFY+G+W +GL+W+ +GGL LVG+I D W L+D ++E +A
Sbjct:   77 AWILLTFLGIFGIHRFYMGKWITGLIWLLTGGLFLVGYIYDYWTLNDQIDELSA 130          
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A3N5F6G0_9BURK (TM2 domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3N5F6G0_9BURK)

HSP 1 Score: 74.3 bits (181), Expect = 1.560e-15
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYN 53
            AWLL  FLG+FG HR Y+G+W +GLLW+ +GGL L+GW+ D W L+  ++E N
Sbjct:   78 AWLLQTFLGVFGLHRLYMGKWLTGLLWLVTGGLFLIGWLYDFWTLNGQIDEIN 130          
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: L0H0B3_9GAMM (Putative membrane protein n=1 Tax=Thioflavicoccus mobilis 8321 TaxID=765912 RepID=L0H0B3_9GAMM)

HSP 1 Score: 74.3 bits (181), Expect = 1.640e-15
Identity = 28/54 (51.85%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNA 54
            AW+L  FLG+FG HRFY+G+W +GL+W+ +GGL L+G++ D W L+D ++E N 
Sbjct:   77 AWILLTFLGLFGVHRFYLGKWLTGLIWLLTGGLFLLGYVYDYWTLNDQIDESNG 130          
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A8J6UQ52_9DELT (TM2 domain-containing protein n=1 Tax=Pelovirga terrestris TaxID=2771352 RepID=A0A8J6UQ52_9DELT)

HSP 1 Score: 74.3 bits (181), Expect = 1.680e-15
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    2 WLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYN 53
            W+L  FLGIFG HRFY+G+W +GL+W F+GGL L+G++ D W L++ V+E N
Sbjct:   77 WILMTFLGIFGVHRFYLGKWITGLIWFFTGGLFLIGYLYDFWTLNEQVDEVN 128          
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: UPI001FE98F66 (TM2 domain-containing protein n=1 Tax=Allochromatium palmeri TaxID=231048 RepID=UPI001FE98F66)

HSP 1 Score: 72.0 bits (175), Expect = 3.230e-15
Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    2 WLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYN 53
            W+L  FLG+FG HRFY+G+W +GL+W+ +GGL LVG++ D W L+D +E  N
Sbjct:   20 WILLTFLGLFGVHRFYLGKWITGLIWLLTGGLFLVGYLYDYWTLNDQIETVN 71          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DBD9_CAFRO3.230e-1755.74TM2 domain-containing protein n=3 Tax=Cafeteria ro... [more]
UPI001F5BD88F4.030e-1757.41TM2 domain-containing protein n=2 Tax=Thiococcus p... [more]
A0A1A9F6F7_9GAMM4.740e-1662.96Uncharacterized protein n=3 Tax=Marinobacterium Ta... [more]
A0A1P8WBM5_9PLAN7.140e-1651.61TM2 domain-containing protein n=1 Tax=Fuerstiella ... [more]
A0A3E0PZE5_9BACT7.660e-1658.49NINE protein n=1 Tax=Planctomycetes bacterium TaxI... [more]
A0A6M0JW12_9GAMM1.090e-1557.41TM2 domain-containing protein n=1 Tax=Thiorhodococ... [more]
A0A3N5F6G0_9BURK1.560e-1554.72TM2 domain-containing protein n=1 Tax=Burkholderia... [more]
L0H0B3_9GAMM1.640e-1551.85Putative membrane protein n=1 Tax=Thioflavicoccus ... [more]
A0A8J6UQ52_9DELT1.680e-1555.77TM2 domain-containing protein n=1 Tax=Pelovirga te... [more]
UPI001FE98F663.230e-1553.85TM2 domain-containing protein n=1 Tax=Allochromati... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007829TM2 domainPFAMPF05154TM2coord: 1..43
e-value: 6.4E-15
score: 55.2
NoneNo IPR availablePANTHERPTHR21016:SF0TM2 DOMAIN-CONTAINING PROTEIN DDB_G0287015coord: 1..55
NoneNo IPR availablePANTHERPTHR21016BETA-AMYLOID BINDING PROTEIN-RELATEDcoord: 1..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..62
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..24
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92927contigM-pyrifera_M_contig92927:57..347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92927.21489.1mRNA_M-pyrifera_M_contig92927.21489.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig92927 57..347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig92927.21489.1 ID=prot_M-pyrifera_M_contig92927.21489.1|Name=mRNA_M-pyrifera_M_contig92927.21489.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=62bp
AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVE
EYNAILFQREFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007829TM2