mRNA_M-pyrifera_M_contig92927.21489.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A5A8DBD9_CAFRO (TM2 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBD9_CAFRO) HSP 1 Score: 78.6 bits (192), Expect = 3.230e-17 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 1 Query: 1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNAILFQREF 183 A+ LW LGIFG HRFY+G W++GLLWM + GL LVGWI DAW + D V E+N + F Sbjct: 9 AYALWLVLGIFGGHRFYLGHWRTGLLWMCTCGLFLVGWITDAWRIPDLVNEHNREAWDHHF 69
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: UPI001F5BD88F (TM2 domain-containing protein n=2 Tax=Thiococcus pfennigii TaxID=1057 RepID=UPI001F5BD88F) HSP 1 Score: 78.6 bits (192), Expect = 4.030e-17 Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNA 162 AW+L FLG+FG HRFY+G+W +GLLW+ +GGL LVG++ D W L+D ++E NA Sbjct: 79 AWILLTFLGLFGVHRFYLGKWPTGLLWLLTGGLFLVGYVYDYWTLNDQIDEVNA 132
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A1A9F6F7_9GAMM (Uncharacterized protein n=3 Tax=Marinobacterium TaxID=48075 RepID=A0A1A9F6F7_9GAMM) HSP 1 Score: 75.5 bits (184), Expect = 4.740e-16 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNA 162 AW+L FLGIFGAHRFY+G+W SGLL++ +GGLLL+G I D W L+D V E N Sbjct: 66 AWILLTFLGIFGAHRFYMGKWLSGLLYLLTGGLLLIGVIYDFWTLNDQVSENNG 119
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A1P8WBM5_9PLAN (TM2 domain-containing protein n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WBM5_9PLAN) HSP 1 Score: 75.5 bits (184), Expect = 7.140e-16 Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNAILFQREFD 186 AWLL F+G+FG HR Y+G+W SGL+W+ +GGL LVGW+ D W L++ V E N L + D Sbjct: 78 AWLLLTFVGVFGIHRLYLGKWISGLIWLATGGLFLVGWLYDLWTLNEQVNEENQHLSYHQHD 139
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A3E0PZE5_9BACT (NINE protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PZE5_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 7.660e-16 Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 1 Query: 1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYN 159 AWLL FLG FG HRFY+G+W +GLLW+ +GGL L+GW+ D W L+ V E N Sbjct: 86 AWLLLTFLGAFGVHRFYLGKWLTGLLWLVTGGLFLIGWLYDLWTLNGQVSEVN 138
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A6M0JW12_9GAMM (TM2 domain-containing protein n=1 Tax=Thiorhodococcus minor TaxID=57489 RepID=A0A6M0JW12_9GAMM) HSP 1 Score: 75.9 bits (185), Expect = 1.090e-15 Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNA 162 AW+L FLGIFG HRFY+G+W +GL+W+ +GGL LVG+I D W L+D ++E +A Sbjct: 77 AWILLTFLGIFGIHRFYMGKWITGLIWLLTGGLFLVGYIYDYWTLNDQIDELSA 130
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A3N5F6G0_9BURK (TM2 domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3N5F6G0_9BURK) HSP 1 Score: 74.3 bits (181), Expect = 1.560e-15 Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYN 159 AWLL FLG+FG HR Y+G+W +GLLW+ +GGL L+GW+ D W L+ ++E N Sbjct: 78 AWLLQTFLGVFGLHRLYMGKWLTGLLWLVTGGLFLIGWLYDFWTLNGQIDEIN 130
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: L0H0B3_9GAMM (Putative membrane protein n=1 Tax=Thioflavicoccus mobilis 8321 TaxID=765912 RepID=L0H0B3_9GAMM) HSP 1 Score: 74.3 bits (181), Expect = 1.640e-15 Identity = 28/54 (51.85%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 1 AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYNA 162 AW+L FLG+FG HRFY+G+W +GL+W+ +GGL L+G++ D W L+D ++E N Sbjct: 77 AWILLTFLGLFGVHRFYLGKWLTGLIWLLTGGLFLLGYVYDYWTLNDQIDESNG 130
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: A0A8J6UQ52_9DELT (TM2 domain-containing protein n=1 Tax=Pelovirga terrestris TaxID=2771352 RepID=A0A8J6UQ52_9DELT) HSP 1 Score: 74.3 bits (181), Expect = 1.680e-15 Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 4 WLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYN 159 W+L FLGIFG HRFY+G+W +GL+W F+GGL L+G++ D W L++ V+E N Sbjct: 77 WILMTFLGIFGVHRFYLGKWITGLIWFFTGGLFLIGYLYDFWTLNEQVDEVN 128
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Match: UPI001FE98F66 (TM2 domain-containing protein n=1 Tax=Allochromatium palmeri TaxID=231048 RepID=UPI001FE98F66) HSP 1 Score: 72.0 bits (175), Expect = 3.230e-15 Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 4 WLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEEYN 159 W+L FLG+FG HRFY+G+W +GL+W+ +GGL LVG++ D W L+D +E N Sbjct: 20 WILLTFLGLFGVHRFYLGKWITGLIWLLTGGLFLVGYLYDYWTLNDQIETVN 71 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92927.21489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig92927.21489.1 >prot_M-pyrifera_M_contig92927.21489.1 ID=prot_M-pyrifera_M_contig92927.21489.1|Name=mRNA_M-pyrifera_M_contig92927.21489.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=62bp AWLLWAFLGIFGAHRFYVGRWQSGLLWMFSGGLLLVGWIIDAWLLSDFVEback to top mRNA from alignment at M-pyrifera_M_contig92927:57..347+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig92927.21489.1 ID=mRNA_M-pyrifera_M_contig92927.21489.1|Name=mRNA_M-pyrifera_M_contig92927.21489.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig92927:57..347+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig92927:57..347+ >mRNA_M-pyrifera_M_contig92927.21489.1 ID=mRNA_M-pyrifera_M_contig92927.21489.1|Name=mRNA_M-pyrifera_M_contig92927.21489.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig92927:57..347+ (Macrocystis pyrifera P11B4 male)back to top |