prot_M-pyrifera_M_contig92870.21479.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig92870.21479.1
Unique Nameprot_M-pyrifera_M_contig92870.21479.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length180
Homology
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BLAST of mRNA_M-pyrifera_M_contig92870.21479.1 vs. uniprot
Match: A0A2E7KIZ8_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KIZ8_9PLAN)

HSP 1 Score: 320 bits (819), Expect = 1.530e-109
Identity = 176/180 (97.78%), Postives = 177/180 (98.33%), Query Frame = 0 
Query:    1 MINSDKETLTFLCEDQFSFPIVFEKLKALFIDFPKTIFGVVYASCVICFISLRYFPNNIIAFIVVALLLFGVISLPSSFSEIRTIVEIFLIAIAGIAALLFVAIILSIFIPPEVSFEKERIKIGGKSIKSKEIIRIQITETPKSYHIILHYRDSDAKSDSQDTLYLVINDSTKEKLSKMS 180
            MINSDKETLTFLCEDQFSFPIVFEKLKALFIDFPKTIFGVVYASCVICFISLRYFPNNIIAFIVVALLLFGVISLPSSFSEIRTIVEIFLIAIAGIAALLFVAIIL IFIPPEVSFEKERIKIGGKSIKSKEIIRIQITETPKSYHI LHYRDSDAKSDSQDTLYLV N+STKEKLSKMS
Sbjct:    1 MINSDKETLTFLCEDQFSFPIVFEKLKALFIDFPKTIFGVVYASCVICFISLRYFPNNIIAFIVVALLLFGVISLPSSFSEIRTIVEIFLIAIAGIAALLFVAIILLIFIPPEVSFEKERIKIGGKSIKSKEIIRIQITETPKSYHINLHYRDSDAKSDSQDTLYLVFNESTKEKLSKMS 180
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92870.21479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E7KIZ8_9PLAN1.530e-10997.78Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..52
NoneNo IPR availableTMHMMTMhelixcoord: 59..78
NoneNo IPR availableTMHMMTMhelixcoord: 30..52
NoneNo IPR availableTMHMMTMhelixcoord: 88..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92870contigM-pyrifera_M_contig92870:1..540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92870.21479.1mRNA_M-pyrifera_M_contig92870.21479.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig92870 1..540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig92870.21479.1 ID=prot_M-pyrifera_M_contig92870.21479.1|Name=mRNA_M-pyrifera_M_contig92870.21479.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
MINSDKETLTFLCEDQFSFPIVFEKLKALFIDFPKTIFGVVYASCVICFI
SLRYFPNNIIAFIVVALLLFGVISLPSSFSEIRTIVEIFLIAIAGIAALL
FVAIILSIFIPPEVSFEKERIKIGGKSIKSKEIIRIQITETPKSYHIILH
YRDSDAKSDSQDTLYLVINDSTKEKLSKMS
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