prot_M-pyrifera_M_contig9282.21463.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9282.21463.1
Unique Nameprot_M-pyrifera_M_contig9282.21463.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length54
Homology
BLAST of mRNA_M-pyrifera_M_contig9282.21463.1 vs. uniprot
Match: A0A6H5K3X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X2_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 4.740e-27
Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    1 VQPFTEKEPAAAARSRHFIAEGIPLRCDRCHQDVVGPLFRCIHCPSFVCCLECQ 54
            V PFTE+EPAAAARSRHFIA+GI LRCDRCH+DVVGPLFRC+HCPSF CCLECQ
Sbjct:  625 VTPFTEQEPAAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ 678          
BLAST of mRNA_M-pyrifera_M_contig9282.21463.1 vs. uniprot
Match: A0A812RJH2_9DINO (RNF14 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812RJH2_9DINO)

HSP 1 Score: 52.4 bits (124), Expect = 1.850e-6
Identity = 19/29 (65.52%), Postives = 21/29 (72.41%), Query Frame = 0
Query:   26 RCDRCHQDVVGPLFRCIHCPSFVCCLECQ 54
            RC RCHQD+VGP FRCIHCP +  C  C 
Sbjct:  306 RCSRCHQDIVGPRFRCIHCPDYNLCASCD 334          
BLAST of mRNA_M-pyrifera_M_contig9282.21463.1 vs. uniprot
Match: A0A812YGP9_9DINO (RNF14 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YGP9_9DINO)

HSP 1 Score: 49.3 bits (116), Expect = 2.270e-5
Identity = 18/29 (62.07%), Postives = 20/29 (68.97%), Query Frame = 0
Query:   26 RCDRCHQDVVGPLFRCIHCPSFVCCLECQ 54
            RC RC QD+VGP FRCIHCP +  C  C 
Sbjct:  316 RCSRCQQDIVGPRFRCIHCPDYNLCASCD 344          
BLAST of mRNA_M-pyrifera_M_contig9282.21463.1 vs. uniprot
Match: A0A813CMB1_9DINO (Hsdl2 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813CMB1_9DINO)

HSP 1 Score: 49.3 bits (116), Expect = 2.280e-5
Identity = 18/29 (62.07%), Postives = 20/29 (68.97%), Query Frame = 0
Query:   26 RCDRCHQDVVGPLFRCIHCPSFVCCLECQ 54
            RC RC QD+VGP FRCIHCP +  C  C 
Sbjct:  414 RCSRCRQDIVGPRFRCIHCPDYNLCASCD 442          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9282.21463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K3X2_9PHAE4.740e-2787.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A812RJH2_9DINO1.850e-665.52RNF14 protein n=1 Tax=Symbiodinium sp. CCMP2456 Ta... [more]
A0A812YGP9_9DINO2.270e-562.07RNF14 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A813CMB1_9DINO2.280e-562.07Hsdl2 protein n=1 Tax=Symbiodinium necroappetens T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 22..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9282contigM-pyrifera_M_contig9282:337..498 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9282.21463.1mRNA_M-pyrifera_M_contig9282.21463.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9282 337..498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9282.21463.1 ID=prot_M-pyrifera_M_contig9282.21463.1|Name=mRNA_M-pyrifera_M_contig9282.21463.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp
VQPFTEKEPAAAARSRHFIAEGIPLRCDRCHQDVVGPLFRCIHCPSFVCC
LECQ
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