prot_M-pyrifera_M_contig926.21421.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig926.21421.1
Unique Nameprot_M-pyrifera_M_contig926.21421.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length120
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig926.21421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..120
NoneNo IPR availableTMHMMTMhelixcoord: 90..107
NoneNo IPR availableTMHMMTMhelixcoord: 56..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig926contigM-pyrifera_M_contig926:18223..18582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig926.21421.1mRNA_M-pyrifera_M_contig926.21421.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig926 18223..18583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig926.21421.1 ID=prot_M-pyrifera_M_contig926.21421.1|Name=mRNA_M-pyrifera_M_contig926.21421.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
RCTRPFLTCFVRRSERGGAGSLTDVKCFFPSISAFGSRVRLSGFPPNNRK
TCATCFFRAFFCLLPFSFFFHLLSARTLFSRFVGAPNLPGMYWLLVLPIV
KEVVRVVQRWRRAMNTFFSY
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