prot_M-pyrifera_M_contig926.21418.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig926.21418.1
Unique Nameprot_M-pyrifera_M_contig926.21418.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length171
Homology
BLAST of mRNA_M-pyrifera_M_contig926.21418.1 vs. uniprot
Match: A0A6H5JWV5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWV5_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 6.460e-101
Identity = 147/170 (86.47%), Postives = 152/170 (89.41%), Query Frame = 0
Query:    1 MTVNAPWSTLRPNPRDQRERAAADANYGVGDGPHSTKDGETEIHWDVTDFGKRMAFGGIVGGVTGITFGAMDGHRVIRDDGIGKFPTTALKTREFMRLTALSGTIFTGFFCTYQGVKYGAKLARGEDDFWNVLIASAGSFAPMLPFPAMRSRYPYAAILVAMDTLNNHIL 170
            MTVN PWSTLRPNPRDQRERAAA+   G G  P   KDGE EI WDVTDFGKRMAFGGIVGGVTGITFGAMDGHR IRDD +GKFPTTALKT+EF RLTALSGTIFTGFFCTYQG+KYGAKLAR EDDFWNVLIASAGSFAPML  PAMRSRYPYAAIL+AMDTLNNHIL
Sbjct:    1 MTVNVPWSTLRPNPRDQRERAAAEFPGG-GKAPPLDKDGEPEIAWDVTDFGKRMAFGGIVGGVTGITFGAMDGHRAIRDDSMGKFPTTALKTKEFTRLTALSGTIFTGFFCTYQGMKYGAKLARKEDDFWNVLIASAGSFAPMLVVPAMRSRYPYAAILIAMDTLNNHIL 169          
BLAST of mRNA_M-pyrifera_M_contig926.21418.1 vs. uniprot
Match: A0A835YQU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU0_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.980e-45
Identity = 82/168 (48.81%), Postives = 109/168 (64.88%), Query Frame = 0
Query:    3 VNAPWSTLRPNPRDQRERAAADANYGVGDGPHSTKDGETEIHWDVTDFGKRMAFGGIVGGVTGITFGAMDGHRVIRDDGIGKFPTTALKTREFMRLTALSGTIFTGFFCTYQGVKYGAKLARGEDDFWNVLIASAGSFAPMLPFPAMRSRYPYAAILVAMDTLNNHIL 170
            VN PW  LR NPR +R+R + +A       P S  D      +D+    +++ FG   GGVTGI FG MD HRVI   G  +F T A K +E  R+TA +GT+F G+F  YQG+KYG +  RGED F+NV +A+A S AP++PFPA+R+R PY A LVA+DTLN+H+L
Sbjct:    6 VNVPWRELRHNPRTERDRLS-EAELSDESKPES--DATFMDRFDMGMMNRKLIFGVACGGVTGIMFGLMDSHRVISKTG--QFFTLAAKVKETTRMTAFTGTVFGGYFAAYQGIKYGIQAYRGEDTFFNVFMATAISIAPVVPFPALRARLPYMAFLVAIDTLNSHVL 168          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig926.21418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWV5_9PHAE6.460e-10186.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQU0_9STRA2.980e-4548.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..74
NoneNo IPR availableTMHMMTMhelixcoord: 98..116
NoneNo IPR availableTMHMMTMhelixcoord: 129..148
NoneNo IPR availableTMHMMTMhelixcoord: 55..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig926contigM-pyrifera_M_contig926:1801..4836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig926.21418.1mRNA_M-pyrifera_M_contig926.21418.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig926 1801..4836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig926.21418.1 ID=prot_M-pyrifera_M_contig926.21418.1|Name=mRNA_M-pyrifera_M_contig926.21418.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp
MTVNAPWSTLRPNPRDQRERAAADANYGVGDGPHSTKDGETEIHWDVTDF
GKRMAFGGIVGGVTGITFGAMDGHRVIRDDGIGKFPTTALKTREFMRLTA
LSGTIFTGFFCTYQGVKYGAKLARGEDDFWNVLIASAGSFAPMLPFPAMR
SRYPYAAILVAMDTLNNHIL*
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