prot_M-pyrifera_M_contig9259.21416.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9259.21416.1
Unique Nameprot_M-pyrifera_M_contig9259.21416.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length239
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig9259.21416.1 vs. uniprot
Match: D7G443_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G443_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 3.260e-59
Identity = 97/153 (63.40%), Postives = 122/153 (79.74%), Query Frame = 0 
Query:   84 VVFAWSFLGFETHFSIRGRRRRFLSPFSSLGLVAFLYLLLFVLSVGIWIFGTWAVAKDVEAGSCSRTVPVLYNYSAVLVIIYWVGVMFGGVELVATMCGKRIKSGAQASLAKTKQYAEDRDRRDEQAAERQVVGRKFDERDEEGNGTIEREQA 236
            +VFAWSFLGFETHFSIRGR+RRFL PFSSL  VA LYLLLF +S+ IWIFGTWA+ KD    SC+  VP+LY++   LV +YWVGV+FG V L+  + GK+I+SGAQA++ K KQ+A++RD+     AE+Q+V RKFD RDEEGNGTI+R+QA
Sbjct:    1 MVFAWSFLGFETHFSIRGRKRRFLRPFSSLSFVALLYLLLFSMSMAIWIFGTWAIVKDRVGNSCANEVPLLYSFCVALVAVYWVGVVFGAVGLIKVLFGKKIQSGAQATVEKGKQFAQNRDKEQVLEAEQQLVARKFDARDEEGNGTIDRQQA 153
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9259.21416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G443_ECTSI3.260e-5963.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 179..238
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..178
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 155..177
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 28..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9259contigM-pyrifera_M_contig9259:2516..8697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9259.21416.1mRNA_M-pyrifera_M_contig9259.21416.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9259 2516..8697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9259.21416.1 ID=prot_M-pyrifera_M_contig9259.21416.1|Name=mRNA_M-pyrifera_M_contig9259.21416.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=239bp
MDGIDNEPEAVAAALAASSAAQMKWASFVLLGPLVPSLLAITNIVIGGAV
VKADVIDPDAAFSCGYRADIFVRATIVNSYLLLVVFAWSFLGFETHFSIR
GRRRRFLSPFSSLGLVAFLYLLLFVLSVGIWIFGTWAVAKDVEAGSCSRT
VPVLYNYSAVLVIIYWVGVMFGGVELVATMCGKRIKSGAQASLAKTKQYA
EDRDRRDEQAAERQVVGRKFDERDEEGNGTIEREQANI*
back to top