prot_M-pyrifera_M_contig9258.21414.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9258.21414.1
Unique Nameprot_M-pyrifera_M_contig9258.21414.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
BLAST of mRNA_M-pyrifera_M_contig9258.21414.1 vs. uniprot
Match: D8LH74_ECTSI (Mitochondrial import inner membrane translocase subunit TIM17 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH74_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.810e-52
Identity = 87/104 (83.65%), Postives = 97/104 (93.27%), Query Frame = 0
Query:    4 TFGKVPDVGLLKSVQTKAVQMGGDWGKLTAAFSGFTSASTVIRGRNDKWDQVVGACGAGAFLNRAKGPSGMAQGAATYGLFSLIFAVQS-KEDALDVVDIPVDA 106
            +FG+VPDVG LKSVQTKAV+MGG+WG+L+AAF+GFTS STVIRGRNDKWDQV+GACGAGAFLNRAKGP GMAQGAATYGLFSLIFA  S ++D LDVVDIPVDA
Sbjct:  109 SFGRVPDVGWLKSVQTKAVEMGGNWGQLSAAFTGFTSISTVIRGRNDKWDQVLGACGAGAFLNRAKGPQGMAQGAATYGLFSLIFAFPSGQDDELDVVDIPVDA 212          
BLAST of mRNA_M-pyrifera_M_contig9258.21414.1 vs. uniprot
Match: A0A7S1T4X3_9RHOD (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T4X3_9RHOD)

HSP 1 Score: 61.2 bits (147), Expect = 2.930e-9
Identity = 29/76 (38.16%), Postives = 47/76 (61.84%), Query Frame = 0
Query:   28 WGKLTAAFSGFTSASTVIRGRNDKWDQVVGACGAGAFLNRAKGPSGMAQGAATYGLFSLIFAVQ----SKEDALDV 99
            WG ++A +SG  + +  IRG++D+++ + GACG+GA      GP    QG A++ LF  +F V     SKE+A+D+
Sbjct:   93 WGGISAIYSGLQATARAIRGKDDRYNALAGACGSGAVFALGSGPRAALQGCASFALFGYVFDVMFYPNSKEEAVDM 168          
BLAST of mRNA_M-pyrifera_M_contig9258.21414.1 vs. uniprot
Match: A0A1X6P919_PORUM (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P919_PORUM)

HSP 1 Score: 57.4 bits (137), Expect = 1.220e-7
Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0
Query:   28 WGKLTAAFSGFTSASTVIRGRNDKWDQVVGACGAGAFLNRAKG--PSGMAQGAATYGLFSLI 87
            WG ++A +SG  +A+ V R +ND+W+ V+GACG+GA  + A G  P    QG  ++ LFS +
Sbjct:  124 WGGVSAVYSGLQTAAKVARAKNDRWNNVIGACGSGAAFSCASGGGPRAAVQGCVSFALFSYV 185          
BLAST of mRNA_M-pyrifera_M_contig9258.21414.1 vs. uniprot
Match: A0A5J4YNE8_PORPP (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNE8_PORPP)

HSP 1 Score: 56.6 bits (135), Expect = 2.160e-7
Identity = 32/89 (35.96%), Postives = 50/89 (56.18%), Query Frame = 0
Query:    2 GATFGKVPDVGL---LKSVQTKAVQMGGDWGKLTAAFSGFTSASTVIRGRNDKWDQVVGACGAGAFLNRAKGPSGMAQGAATYGLFSLI 87
            GA FG V  +     LK    +A   G  WG + A ++G  +A+  IRG +D W+ V+GACG+G +L+  +G   MAQG  ++  F+ +
Sbjct:   86 GAIFGFVSGLASKRNLKLALGEARSSGISWGGIGALYAGIQTAAKNIRGVDDTWNTVLGACGSGVYLSWGQGGRSMAQGCVSFAAFTYV 174          
BLAST of mRNA_M-pyrifera_M_contig9258.21414.1 vs. uniprot
Match: L1JQE8_GUITC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQE8_GUITC)

HSP 1 Score: 55.8 bits (133), Expect = 2.910e-7
Identity = 29/86 (33.72%), Postives = 42/86 (48.84%), Query Frame = 0
Query:   15 KSVQTKAVQMGGDWGKLTAAFSGFTSASTVIRGRNDKWDQVVGACGAGAFLNRAKGPSGMAQGAATYGLFSLIFA--VQSKEDALD 98
            K   +     G  WG ++AAF G    +  IRG+ DKW+ ++GAC AG   N  KG   MA G   + + S I    +  K+D  +
Sbjct:   62 KGAMSNGFSTGTAWGSMSAAFCGVEVLAREIRGKTDKWNNMMGACSAGVVGNCGKGVGAMASGCVNFAVMSYIIDLFIDKKQDPFE 147          
BLAST of mRNA_M-pyrifera_M_contig9258.21414.1 vs. uniprot
Match: A0A7S1H0Q5_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H0Q5_HEMAN)

HSP 1 Score: 53.9 bits (128), Expect = 2.330e-6
Identity = 28/67 (41.79%), Postives = 36/67 (53.73%), Query Frame = 0
Query:    1 MGATFGKVPDV-GLLKSVQTKAVQMGGDWGKLTAAFSGFTSASTVIRGRNDKWDQVVGACGAGAFLN 66
            +G   G V    G  K+     V+ G  WG ++AAF G    +  IRG  DKW+ +VGACGAGA  N
Sbjct:  136 IGMVIGSVTGAKGGFKAAMANGVKTGNSWGIMSAAFCGLEVLAKEIRGTQDKWNNMVGACGAGACAN 202          
BLAST of mRNA_M-pyrifera_M_contig9258.21414.1 vs. uniprot
Match: A0A7S0VK43_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VK43_9CRYP)

HSP 1 Score: 53.5 bits (127), Expect = 3.200e-6
Identity = 27/67 (40.30%), Postives = 36/67 (53.73%), Query Frame = 0
Query:    1 MGATFGKVPDVGL-LKSVQTKAVQMGGDWGKLTAAFSGFTSASTVIRGRNDKWDQVVGACGAGAFLN 66
            +G   G V   G   K+     V+ G  WG ++AAF G    +  +RG  DKW+ +VGACGAGA  N
Sbjct:  136 IGMVIGSVTGAGGGFKAAMANGVKTGNSWGIMSAAFCGLEVLAREVRGTQDKWNNMVGACGAGACAN 202          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9258.21414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LH74_ECTSI2.810e-5283.65Mitochondrial import inner membrane translocase su... [more]
A0A7S1T4X3_9RHOD2.930e-938.16Mitochondrial import inner membrane translocase su... [more]
A0A1X6P919_PORUM1.220e-741.94Mitochondrial import inner membrane translocase su... [more]
A0A5J4YNE8_PORPP2.160e-735.96Mitochondrial import inner membrane translocase su... [more]
L1JQE8_GUITC2.910e-733.72Mitochondrial import inner membrane translocase su... [more]
A0A7S1H0Q5_HEMAN2.330e-641.79Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0VK43_9CRYP3.200e-640.30Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 14..85
e-value: 2.0E-13
score: 50.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9258contigM-pyrifera_M_contig9258:3150..3795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9258.21414.1mRNA_M-pyrifera_M_contig9258.21414.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9258 1175..4396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9258.21414.1 ID=prot_M-pyrifera_M_contig9258.21414.1|Name=mRNA_M-pyrifera_M_contig9258.21414.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
MGATFGKVPDVGLLKSVQTKAVQMGGDWGKLTAAFSGFTSASTVIRGRND
KWDQVVGACGAGAFLNRAKGPSGMAQGAATYGLFSLIFAVQSKEDALDVV
DIPVDALAKKR*
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