prot_M-pyrifera_M_contig92554.21408.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig92554.21408.1
Unique Nameprot_M-pyrifera_M_contig92554.21408.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length114
Homology
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Match: X0Z5Y7_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0Z5Y7_9ZZZZ)

HSP 1 Score: 72.4 bits (176), Expect = 5.120e-14
Identity = 45/123 (36.59%), Postives = 74/123 (60.16%), Query Frame = 0
Query:    1 NKHITDDLDLIREDYKQQRDFFKMRSYEKAIANISRYTKAIENKKEAMRLPGVGKGIAEKIEEILEKGGSEHAEKMKA-----DPTLLAKEDL----ERILNVGPKKAQQLMDAGYRSLGDVR 114
            N+ + ++L ++++ YK+  D +++ +Y KAI  IS Y + I ++ +AM++ GVGKGIA+KI+E L+ G  E  E  K      D     KE +    ++I  VGP KA++L   G RS+ D+R
Sbjct:    2 NQELLNNLRILQDYYKKVGDNWRVLAYTKAITAISIYPEEITSRAQAMKIKGVGKGIADKIQEFLKFGKIEKVEDAKKEMGEIDKKRTTKEQIIDSFKKIWGVGPVKAEELFGKGMRSISDIR 124          
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Match: UPI001ED89F66 (DNA polymerase beta-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED89F66)

HSP 1 Score: 75.1 bits (183), Expect = 1.240e-13
Identity = 38/96 (39.58%), Postives = 64/96 (66.67%), Query Frame = 0
Query:   19 RDFFKMRSYEKAIANISRYTKAIENKKEAMRLPGVGKGIAEKIEEILEKGGSEHAEKMKADPTLLAKEDLERILNVGPKKAQQLMDAGYRSLGDVR 114
            R+ +K  +Y KA ++++ Y K I++ +EA +LPGVG+ IA+KI+E L+ G  +  EK+ AD T        R+  +GP KA++L+DAG++ L D++
Sbjct:   33 RNIYKYNAYRKAASSLADYGKRIQSGEEARKLPGVGEKIAKKIDEFLQTGKLQKLEKIHADDTTTIINLFTRVSGIGPAKAKELLDAGFKKLEDLK 128          
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Match: UPI001ED82F27 (DNA polymerase lambda n=1 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED82F27)

HSP 1 Score: 73.2 bits (178), Expect = 9.110e-13
Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 0
Query:    1 NKHITDDLDLIREDYKQQRDFFKMRSYEKAIANISRYTKAIENKKEAMRLPGVGKGIAEKIEEILEKGGSEHAEKM----KADPTLLAKEDLERILNVGPKKAQQLMDAGYRSLGDVR 114
            NKHITD L+++ + Y  Q D ++  SY KA+  +  Y K + + +EA ++PG+GK +A+KI+EI+E G   H  K+    +A P L   E    I   G K AQ     GYR+L D+R
Sbjct:  246 NKHITDKLEVLAKAYTHQGDKWRALSYSKAVNALKSYHKPVTSHQEACQIPGIGKRMADKIDEIMESG---HLRKLDHIGEAVPVL---ELFTNIWGAGTKTAQLWYQQGYRTLEDIR 357          
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Match: UPI001FB5A4BF (DNA polymerase lambda n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB5A4BF)

HSP 1 Score: 73.2 bits (178), Expect = 9.110e-13
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 0
Query:    1 NKHITDDLDLIREDYKQQRDFFKMRSYEKAIANISRYTKAIENKKEAMRLPGVGKGIAEKIEEILEKGGSEHAEKM----KADPTLLAKEDLERILNVGPKKAQQLMDAGYRSLGDVR 114
            NKHITD L+++ + Y  Q D ++   Y KA+  +  Y K + + +EA ++PG+GK +A+KI+EI+E G   H  K+    +A P L   E    I   G K AQQ    G+R+L D+R
Sbjct:  248 NKHITDKLEVLAKAYTHQGDKWRALGYSKAVNALKSYHKPVTSYQEACQIPGIGKSMADKIDEIMESG---HLRKLDHIGEAVPVL---ELFTNIWGAGAKTAQQWYQQGFRTLEDIR 359          
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Match: A0A6P7M371_BETSP (DNA polymerase lambda n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7M371_BETSP)

HSP 1 Score: 72.8 bits (177), Expect = 1.240e-12
Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    1 NKHITDDLDLIREDYKQQRDFFKMRSYEKAIANISRYTKAIENKKEAMRLPGVGKGIAEKIEEILEKGGSEHAEKMKADPTLLAKEDLERILNVGPKKAQQLMDAGYRSLGDVR 114
            NKHITD L+++ + Y  Q D ++  SY KA+ ++  Y K I + +EA ++PG+GK +A+KI+EI+E G     + +  D  +L  E    I   G K AQ     G+R+L D+R
Sbjct:  240 NKHITDKLEVLAKAYTHQGDRWRALSYSKAVNSLKSYHKPITSYQEACQIPGIGKRMADKIDEIMESGHLRKLDHIGEDVPVL--ELFTNIWGAGFKTAQLWYQQGFRTLEDIR 351          
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Match: A0A3Q1K9J5_ANATE (DNA polymerase lambda n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1K9J5_ANATE)

HSP 1 Score: 72.4 bits (176), Expect = 1.700e-12
Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = 0
Query:    1 NKHITDDLDLIREDYKQQRDFFKMRSYEKAIANISRYTKAIENKKEAMRLPGVGKGIAEKIEEILEKGGSEHAEKMKADPTLLAKEDLERILNVGPKKAQQLMDAGYRSLGDVR 114
            NKHITD L+++ + Y  Q D ++  SY KA+  +  Y K I + +EA ++PG+GK +A+KI+EI+E G     + +  D  +L  E    I   G K AQ     G+R+L D+R
Sbjct:  246 NKHITDKLEVLAKAYTHQGDKWRALSYSKAVNALKSYHKPITSYQEACQIPGIGKRMADKIDEIMESGHLRKLDYIGEDVPVL--ELFTNIWGAGSKTAQLWYQQGFRTLEDIR 357          
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Match: H3D3G8_TETNG (DNA polymerase lambda n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3D3G8_TETNG)

HSP 1 Score: 72.4 bits (176), Expect = 1.700e-12
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 0
Query:    1 NKHITDDLDLIREDYKQQRDFFKMRSYEKAIANISRYTKAIENKKEAMRLPGVGKGIAEKIEEILEKGGSEHAEKM----KADPTLLAKEDLERILNVGPKKAQQLMDAGYRSLGDVR 114
            NKHITD L+++ + Y  Q D ++  SY KA+  +  Y K + + +EA ++PG+GK +A+KI+EI+E G   H  K+    +A P L   E    I   G K AQ     G+R+L D+R
Sbjct:  251 NKHITDKLEVLAKAYTHQGDKWRALSYSKAVNALKSYHKPVTSYQEACQIPGIGKSMADKIDEIMESG---HLRKLDHIGEAVPVL---ELFSNIWGAGAKTAQLWYQQGFRTLEDIR 362          
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Match: I3KRF4_ORENI (DNA polymerase lambda n=12 Tax=Cichlidae TaxID=8113 RepID=I3KRF4_ORENI)

HSP 1 Score: 72.4 bits (176), Expect = 1.700e-12
Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 0
Query:    1 NKHITDDLDLIREDYKQQRDFFKMRSYEKAIANISRYTKAIENKKEAMRLPGVGKGIAEKIEEILEKGGSEHAEKM----KADPTLLAKEDLERILNVGPKKAQQLMDAGYRSLGDVR 114
            NKHITD L+L+ + Y  Q D ++   Y KA+  +  Y K I + +EA ++PG+GK +A+KIEEI+E G   H  K+    +A P L   E    I   G K AQ     G+R+L D+R
Sbjct:  264 NKHITDKLELLAKAYTHQGDKWRALGYSKAVNALKSYHKPITSYQEACQIPGIGKRMADKIEEIMESG---HLRKLDHIGEAVPVL---ELFVNIWGAGTKTAQLWYQQGFRTLDDIR 375          
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Match: A0A667XLD1_9TELE (DNA polymerase lambda n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667XLD1_9TELE)

HSP 1 Score: 72.0 bits (175), Expect = 2.310e-12
Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 0
Query:    1 NKHITDDLDLIREDYKQQRDFFKMRSYEKAIANISRYTKAIENKKEAMRLPGVGKGIAEKIEEILEKGGSEHAEKM----KADPTLLAKEDLERILNVGPKKAQQLMDAGYRSLGDVR 114
            NKHITD L+++ + Y  Q D ++  SY KA+  +  Y K I + +EA ++PG+GK +A+KI+EI+E G   H  K+    +A P L   E    I   G K AQ     G+R+L D+R
Sbjct:  244 NKHITDKLEVLAKAYTHQGDKWRALSYSKAVNALKSYHKPITSYQEACQIPGIGKRMADKIDEIMESG---HLRKLDHIGEAVPVL---ELFNNIWGAGAKTAQLWYQQGFRTLEDIR 355          
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Match: UPI001FACAEF2 (DNA polymerase lambda-like n=2 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FACAEF2)

HSP 1 Score: 72.0 bits (175), Expect = 2.320e-12
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 0
Query:    1 NKHITDDLDLIREDYKQQRDFFKMRSYEKAIANISRYTKAIENKKEAMRLPGVGKGIAEKIEEILEKGGSEHAEKM----KADPTLLAKEDLERILNVGPKKAQQLMDAGYRSLGDVR 114
            NKHITD L+++ + Y  Q D ++   Y KA+  +  Y K +++ +EA ++PG+GK +A+KIEEI+E G   H  K+    +A P L   E    I   G K AQ     G+R+L D+R
Sbjct:  248 NKHITDKLEVLAKAYTHQGDKWRALGYSKAVNALKSYHKPVQSYQEACQIPGIGKRMADKIEEIMESG---HLRKLDHIGEAVPVL---ELFTNIWGAGAKTAQLWYQQGFRTLEDIR 359          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92554.21408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
X0Z5Y7_9ZZZZ5.120e-1436.59Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
UPI001ED89F661.240e-1339.58DNA polymerase beta-like n=1 Tax=Ischnura elegans ... [more]
UPI001ED82F279.110e-1338.98DNA polymerase lambda n=1 Tax=Scatophagus argus Ta... [more]
UPI001FB5A4BF9.110e-1338.14DNA polymerase lambda n=1 Tax=Mugil cephalus TaxID... [more]
A0A6P7M371_BETSP1.240e-1237.72DNA polymerase lambda n=1 Tax=Betta splendens TaxI... [more]
A0A3Q1K9J5_ANATE1.700e-1237.72DNA polymerase lambda n=1 Tax=Anabas testudineus T... [more]
H3D3G8_TETNG1.700e-1238.14DNA polymerase lambda n=2 Tax=Tetraodon nigrovirid... [more]
I3KRF4_ORENI1.700e-1239.83DNA polymerase lambda n=12 Tax=Cichlidae TaxID=811... [more]
A0A667XLD1_9TELE2.310e-1238.98DNA polymerase lambda n=1 Tax=Myripristis murdjan ... [more]
UPI001FACAEF22.320e-1238.14DNA polymerase lambda-like n=2 Tax=Girardinichthys... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..47
NoneNo IPR availableGENE3D1.10.150.20coord: 78..114
e-value: 3.6E-6
score: 28.6
NoneNo IPR availablePANTHERPTHR11276:SF28DNA POLYMERASE LAMBDAcoord: 1..114
NoneNo IPR availablePANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 1..114
IPR003583Helix-hairpin-helix DNA-binding motif, class 1SMARTSM00278HhH1_4coord: 45..64
e-value: 0.81
score: 18.7
coord: 86..105
e-value: 7.9
score: 15.4
IPR010996DNA polymerase beta-like, N-terminal domainPFAMPF14716HHH_8coord: 1..66
e-value: 7.7E-17
score: 61.4
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 1..77
e-value: 2.6E-21
score: 77.5
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 1..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92554contigM-pyrifera_M_contig92554:283..624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92554.21408.1mRNA_M-pyrifera_M_contig92554.21408.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig92554 283..624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig92554.21408.1 ID=prot_M-pyrifera_M_contig92554.21408.1|Name=mRNA_M-pyrifera_M_contig92554.21408.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp
NKHITDDLDLIREDYKQQRDFFKMRSYEKAIANISRYTKAIENKKEAMRL
PGVGKGIAEKIEEILEKGGSEHAEKMKADPTLLAKEDLERILNVGPKKAQ
QLMDAGYRSLGDVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003583Hlx-hairpin-Hlx_DNA-bd_motif
IPR010996DNA_pol_b-like_N
IPR027421DNA_pol_lamdba_lyase_dom_sf