prot_M-pyrifera_M_contig92341.21375.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig92341.21375.1
Unique Nameprot_M-pyrifera_M_contig92341.21375.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
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BLAST of mRNA_M-pyrifera_M_contig92341.21375.1 vs. uniprot
Match: A0A0L0D2J7_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D2J7_THETB)

HSP 1 Score: 57.4 bits (137), Expect = 7.880e-8
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0 
Query:   12 VVPALPYELLAQNKGAMDNDNGIFYILGYNQSMT-VPNLVGVDVSSGDIVCDATLPFAESGFIGVGQ 77
            V  +LPYE   Q    +D + GI+YI+G N S +    LVGV V++G++V +  LPF  S  IGVGQ
Sbjct:   46 VSSSLPYEAQGQGLATLDEELGIYYIIGTNVSASNAVKLVGVSVATGNVVAETPLPFQSSELIGVGQ 112
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92341.21375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0L0D2J7_THETB7.880e-844.78Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92341contigM-pyrifera_M_contig92341:2..232 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92341.21375.1mRNA_M-pyrifera_M_contig92341.21375.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig92341 2..244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig92341.21375.1 ID=prot_M-pyrifera_M_contig92341.21375.1|Name=mRNA_M-pyrifera_M_contig92341.21375.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
MNATTAAVIRTVVPALPYELLAQNKGAMDNDNGIFYILGYNQSMTVPNLV
GVDVSSGDIVCDATLPFAESGFIGVGQ
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