prot_M-pyrifera_M_contig92333.21371.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig92333.21371.1
Unique Nameprot_M-pyrifera_M_contig92333.21371.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Match: A0A2E3GR66_9PLAN (Integrase n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E3GR66_9PLAN)

HSP 1 Score: 161 bits (408), Expect = 1.560e-47
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0
Query:    1 LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYLPF 76
            LDESAVWRIV+KASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYLPF
Sbjct:  235 LDESAVWRIVRKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYLPF 310          
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Match: A0A518DWL2_9BACT (Tyrosine recombinase XerD n=2 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DWL2_9BACT)

HSP 1 Score: 159 bits (402), Expect = 1.240e-46
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    1 LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYLPF 76
            LDESAVWRIVKKASERAGIDK VSCHWFRHAHASHALDRGCPIHLVQATLGH+SISTTGRYLHARPTDSSGNYLPF
Sbjct:  235 LDESAVWRIVKKASERAGIDKEVSCHWFRHAHASHALDRGCPIHLVQATLGHSSISTTGRYLHARPTDSSGNYLPF 310          
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Match: A0A356A7I1_9PLAN (Integrase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356A7I1_9PLAN)

HSP 1 Score: 157 bits (398), Expect = 4.960e-46
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    1 LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYLPF 76
            LDESAVWRIV KASERAG++KNVSCHWFRHAHASHALDRGCPIHLVQATLGH+SISTTGRYLHARPTDSSGNYLPF
Sbjct:  235 LDESAVWRIVSKASERAGVEKNVSCHWFRHAHASHALDRGCPIHLVQATLGHSSISTTGRYLHARPTDSSGNYLPF 310          
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Match: A0A2E2C2C9_9PLAN (Integrase n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E2C2C9_9PLAN)

HSP 1 Score: 157 bits (397), Expect = 7.010e-46
Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 0
Query:    1 LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYLP 75
            LDESAVWRIVKKASERAGIDK+VSCHWFRHAHASHALDRGCPIHLVQATLGH+SISTTGRYLHARPTDSSGNYLP
Sbjct:  235 LDESAVWRIVKKASERAGIDKDVSCHWFRHAHASHALDRGCPIHLVQATLGHSSISTTGRYLHARPTDSSGNYLP 309          
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Match: A0A257WNT6_9BACT (Integrase n=2 Tax=Planctomycetales bacterium 12-60-4 TaxID=1970541 RepID=A0A257WNT6_9BACT)

HSP 1 Score: 157 bits (397), Expect = 7.010e-46
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0
Query:    1 LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYLPF 76
            LDESAVWRIV KAS RAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGH+SISTTGRYLHARPTDSSGNYLPF
Sbjct:  235 LDESAVWRIVSKASARAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHSSISTTGRYLHARPTDSSGNYLPF 310          
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Match: F0SJ33_RUBBR (Integrase family protein n=1 Tax=Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / IAM 15109 / NBRC 103401 / IFAM 1448) TaxID=756272 RepID=F0SJ33_RUBBR)

HSP 1 Score: 154 bits (389), Expect = 1.110e-44
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0
Query:    1 LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYL 74
            LDESAVWRIVKKA+ERAGIDKNVSCHWFRHAHASHALDR CPIHLVQATLGHASISTTGRYLHARPTDSSGNYL
Sbjct:  235 LDESAVWRIVKKAAERAGIDKNVSCHWFRHAHASHALDRNCPIHLVQATLGHASISTTGRYLHARPTDSSGNYL 308          
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Match: UPI001CC970D7 (tyrosine-type recombinase/integrase n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CC970D7)

HSP 1 Score: 148 bits (373), Expect = 1.500e-44
Identity = 68/74 (91.89%), Postives = 73/74 (98.65%), Query Frame = 0
Query:    1 LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYL 74
            LDESAVWRIVKKAS+RAGIDK+VSCHWFRHAHASHALDRGCPIHLVQATLGH+SISTTGRYLHARP++SSG YL
Sbjct:   45 LDESAVWRIVKKASQRAGIDKDVSCHWFRHAHASHALDRGCPIHLVQATLGHSSISTTGRYLHARPSESSGEYL 118          
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Match: M5TY82_9BACT (Integrase family protein n=2 Tax=Rhodopirellula TaxID=265488 RepID=M5TY82_9BACT)

HSP 1 Score: 148 bits (373), Expect = 3.900e-42
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 0
Query:    1 LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYLPF 76
            LDESAVWRIV KASERAGI+K+VSCHW RHAHASHALDRGCPIHLVQATLGH+SISTTGRYLHA+P+DSSGNYL F
Sbjct:  249 LDESAVWRIVNKASERAGIEKDVSCHWLRHAHASHALDRGCPIHLVQATLGHSSISTTGRYLHAKPSDSSGNYLAF 324          
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Match: UPI001F00BB7F (tyrosine-type recombinase/integrase n=1 Tax=Rubinisphaera sp. JC750 TaxID=2898658 RepID=UPI001F00BB7F)

HSP 1 Score: 142 bits (359), Expect = 2.120e-40
Identity = 64/74 (86.49%), Postives = 73/74 (98.65%), Query Frame = 0
Query:    1 LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYL 74
            L+ESAVWRIV+KASERAGIDK+VSCHWFRHAHASHALDRGCPIHLVQATLGH+SI+TTG+YLHA+P++SSG YL
Sbjct:  213 LNESAVWRIVRKASERAGIDKDVSCHWFRHAHASHALDRGCPIHLVQATLGHSSIATTGKYLHAKPSESSGGYL 286          
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Match: UPI001E61AE88 (tyrosine-type recombinase/integrase n=1 Tax=Roseiconus lacunae TaxID=2605694 RepID=UPI001E61AE88)

HSP 1 Score: 138 bits (348), Expect = 1.440e-38
Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 0
Query:    1 LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATLGHASISTTGRYLHARPTDSSGNYLP 75
            L ESAVWR+VKKA++RAGI K+VSCHWFRH H SHALDRG PIHLVQATLGH+S++TTGRYLHARP+DSSGNYLP
Sbjct:  231 LCESAVWRVVKKATKRAGIPKDVSCHWFRHCHGSHALDRGAPIHLVQATLGHSSVATTGRYLHARPSDSSGNYLP 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92333.21371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3GR66_9PLAN1.560e-4798.68Integrase n=1 Tax=Planctomyces sp. TaxID=37635 Rep... [more]
A0A518DWL2_9BACT1.240e-4697.37Tyrosine recombinase XerD n=2 Tax=Lignipirellula c... [more]
A0A356A7I1_9PLAN4.960e-4694.74Integrase n=1 Tax=Planctomycetaceae bacterium TaxI... [more]
A0A2E2C2C9_9PLAN7.010e-4697.33Integrase n=1 Tax=Gimesia sp. TaxID=2024833 RepID=... [more]
A0A257WNT6_9BACT7.010e-4696.05Integrase n=2 Tax=Planctomycetales bacterium 12-60... [more]
F0SJ33_RUBBR1.110e-4497.30Integrase family protein n=1 Tax=Rubinisphaera bra... [more]
UPI001CC970D71.500e-4491.89tyrosine-type recombinase/integrase n=1 Tax=Bremer... [more]
M5TY82_9BACT3.900e-4289.47Integrase family protein n=2 Tax=Rhodopirellula Ta... [more]
UPI001F00BB7F2.120e-4086.49tyrosine-type recombinase/integrase n=1 Tax=Rubini... [more]
UPI001E61AE881.440e-3882.67tyrosine-type recombinase/integrase n=1 Tax=Roseic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 1..69
e-value: 1.1E-22
score: 83.0
IPR002104Integrase, catalytic domainPFAMPF00589Phage_integrasecoord: 2..65
e-value: 3.9E-17
score: 62.6
NoneNo IPR availablePANTHERPTHR30349PHAGE INTEGRASE-RELATEDcoord: 4..68
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 2..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92333contigM-pyrifera_M_contig92333:3..233 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92333.21371.1mRNA_M-pyrifera_M_contig92333.21371.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig92333 3..233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig92333.21371.1 ID=prot_M-pyrifera_M_contig92333.21371.1|Name=mRNA_M-pyrifera_M_contig92333.21371.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
LDESAVWRIVKKASERAGIDKNVSCHWFRHAHASHALDRGCPIHLVQATL
GHASISTTGRYLHARPTDSSGNYLPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR002104Integrase_catalytic
IPR011010DNA_brk_join_enz