prot_M-pyrifera_M_contig92262.21359.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig92262.21359.1
Unique Nameprot_M-pyrifera_M_contig92262.21359.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length87
Homology
BLAST of mRNA_M-pyrifera_M_contig92262.21359.1 vs. uniprot
Match: A0A832MDZ4_9BACT (PDZ domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A832MDZ4_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 3.520e-6
Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 0
Query:    5 SPWYSGNHAVAQQAAEGEPGYLGIIADDQRTNGTGVRLLKVLPEGPAEKGGLEVADLITAINEKQVRNMQDMAEAIMGSQAGD 87
            +P   G  +V ++   G  G+LG+   D      G ++L+V+PE  AEK G+EV D+ITA+N K  ++  ++   I G   GD
Sbjct:  145 TPLAVGVVSVNRRKIPGRSGFLGVSLGDGEN---GAKVLQVVPESAAEKAGVEVDDVITAVNGKATKSRDELINTIRGQAPGD 224          
BLAST of mRNA_M-pyrifera_M_contig92262.21359.1 vs. uniprot
Match: UPI00198A97B3 (PDZ domain-containing protein n=1 Tax=Fimbriimonadaceae bacterium TaxID=2682144 RepID=UPI00198A97B3)

HSP 1 Score: 52.8 bits (125), Expect = 5.060e-6
Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   22 EPGYLGIIADDQRTNGTGVRLLKVLPEGPAEKGGLEVADLITAINEKQVRNMQDMAEAIMGSQAGD 87
            E G+LG+I DD   N  GV++  ++ E  AE+ GL+  D+I +I+ K+++N  D+ EAI   + GD
Sbjct:  262 ERGFLGVIIDDM-DNDAGVKISDIVEESAAEEIGLKAGDIINSIDGKEMKNYDDVLEAIQNKKPGD 326          
BLAST of mRNA_M-pyrifera_M_contig92262.21359.1 vs. uniprot
Match: Q7VEA7_PROMA (Periplasmic trypsin-like serine protease n=1 Tax=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) TaxID=167539 RepID=Q7VEA7_PROMA)

HSP 1 Score: 51.6 bits (122), Expect = 1.260e-5
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   35 TNGTGVRLLKVLPEGPAEKGGLEVADLITAINEKQVRNMQDMAEAI 80
            TNG G  ++ VLP GPAEK GL+V D+I +IN K V+N QD+   I
Sbjct:  311 TNGKGALIIYVLPGGPAEKRGLKVNDVIISINNKDVKNPQDVVNTI 356          
BLAST of mRNA_M-pyrifera_M_contig92262.21359.1 vs. uniprot
Match: A0A2E3MNZ8_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3MNZ8_9PLAN)

HSP 1 Score: 51.2 bits (121), Expect = 1.700e-5
Identity = 24/64 (37.50%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   24 GYLGIIADDQRTNGTGVRLLKVLPEGPAEKGGLEVADLITAINEKQVRNMQDMAEAIMGSQAGD 87
            G+LG+ ADD    G GVR+  V P G A++ G+EVADL+ A+ ++ V ++  ++  +    +GD
Sbjct:   51 GFLGLRADDFGQQGRGVRVTLVHPGGAADRAGVEVADLVLAVGQRAVVDLDSLSSLLESKTSGD 114          
BLAST of mRNA_M-pyrifera_M_contig92262.21359.1 vs. uniprot
Match: A0A2G2KLC0_9BACT (PDZ domain-containing protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2KLC0_9BACT)

HSP 1 Score: 50.4 bits (119), Expect = 3.170e-5
Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 0
Query:   24 GYLGIIADDQRTNGTGVRLLKVLPEGPAEKGGLEVADLITAINEKQVRNMQDMAEAIMGSQAGD 87
            GYLG + DD +   +GV ++KV P+GPAE+ GL   D +  ++   ++N++ +A  +   + GD
Sbjct:   54 GYLGAVIDDIKDAESGVTVIKVNPDGPAEQAGLRAGDTLQRVDGVVIKNLEHLATVMSKKKPGD 117          
BLAST of mRNA_M-pyrifera_M_contig92262.21359.1 vs. uniprot
Match: A0A5R8Y0V1_9PROT (Periplasmic serine endoprotease DegP-like n=1 Tax=[Halarcobacter] arenosus TaxID=2576037 RepID=A0A5R8Y0V1_9PROT)

HSP 1 Score: 50.1 bits (118), Expect = 4.480e-5
Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 0
Query:   24 GYLGIIADDQRTN-------GTGVRLLKVLPEGPAEKGGLEVADLITAINEKQVRNMQDMAEAI 80
            GYLG++ DD + N        +G  +L V  + PA K GL+  DLIT+IN +++RN +D+   I
Sbjct:  277 GYLGVVIDDLKPNLMKLYKSNSGALVLDVASDTPAAKAGLKRGDLITSINNREIRNRKDLQNVI 340          
BLAST of mRNA_M-pyrifera_M_contig92262.21359.1 vs. uniprot
Match: A0A7C4P106_9BACT (M20/M25/M40 family metallo-hydrolase n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7C4P106_9BACT)

HSP 1 Score: 49.7 bits (117), Expect = 6.210e-5
Identity = 24/61 (39.34%), Postives = 38/61 (62.30%), Query Frame = 0
Query:   26 LGIIADDQRTNGTGVRLLKVLPEGPAEKGGLEVADLITAINEKQVRNMQDMAEAIMGSQAG 86
            LGI+ D   T+  G++++ V    PAE  G++V DLI AIN+K ++N+ D  EA+   + G
Sbjct:  488 LGIMPDVSGTSDEGLKVIGVTEGKPAEIAGIQVGDLIIAINQKSIKNIYDYTEALSALEPG 548          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92262.21359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A832MDZ4_9BACT3.520e-634.94PDZ domain-containing protein n=1 Tax=Phycisphaera... [more]
UPI00198A97B35.060e-639.39PDZ domain-containing protein n=1 Tax=Fimbriimonad... [more]
Q7VEA7_PROMA1.260e-554.35Periplasmic trypsin-like serine protease n=1 Tax=P... [more]
A0A2E3MNZ8_9PLAN1.700e-537.50Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2G2KLC0_9BACT3.170e-534.38PDZ domain-containing protein n=1 Tax=Blastopirell... [more]
A0A5R8Y0V1_9PROT4.480e-539.06Periplasmic serine endoprotease DegP-like n=1 Tax=... [more]
A0A7C4P106_9BACT6.210e-539.34M20/M25/M40 family metallo-hydrolase n=1 Tax=Bacte... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.42.10coord: 12..87
e-value: 1.4E-11
score: 46.1
IPR041489PDZ domain 6PFAMPF17820PDZ_6coord: 44..83
e-value: 1.1E-9
score: 38.0
IPR001478PDZ domainPROSITEPS50106PDZcoord: 12..73
score: 10.034
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 13..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92262contigM-pyrifera_M_contig92262:507..767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92262.21359.1mRNA_M-pyrifera_M_contig92262.21359.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig92262 507..767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig92262.21359.1 ID=prot_M-pyrifera_M_contig92262.21359.1|Name=mRNA_M-pyrifera_M_contig92262.21359.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
MLLVSPWYSGNHAVAQQAAEGEPGYLGIIADDQRTNGTGVRLLKVLPEGP
AEKGGLEVADLITAINEKQVRNMQDMAEAIMGSQAGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041489PDZ_6
IPR001478PDZ
IPR036034PDZ_sf