prot_M-pyrifera_M_contig92234.21351.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig92234.21351.1
Unique Nameprot_M-pyrifera_M_contig92234.21351.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length254
Homology
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BLAST of mRNA_M-pyrifera_M_contig92234.21351.1 vs. uniprot
Match: A0A2E7K748_9PLAN (CHAT domain-containing protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K748_9PLAN)

HSP 1 Score: 492 bits (1266), Expect = 1.460e-158
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0 
Query:    1 RDAKLALYRSLLKPMRAVLGDDHPAYAELLIEIADWSEPASEQTLEQAETATGIYEKNSWHQTPEYARALRIVGRIRNTLRRDDAIVALLKAEGVLKEQRLTSGIDYLITLNELLFYYRNHDQLIEAIPYCETAEELARQLLKVDRGLVAQTCNQVATIYETLGRTDEALENYLRAVNFFDELSGPPSRAQLITLKNVAGLYRRQQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVLGLTSMYQEQERYQQAR 254
            RDAKLALYRSLLKPMRAVLGDDHPAYAELLIEIADWSEPASEQTLEQAETATGIYEKNSWHQTPEYARALRIVGRIRNTLRRDDAI ALLKAEGVLKEQRLTSGIDYLITLNELLFYYRNHDQLIEAIPYCETAEELARQLLKVDRGLVAQTCNQVATIYETLGRTDEALENYLRAVNFFDELSGPPSRAQLITLKNVAGLYRRQQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVLGLTSMYQEQERYQQAR
Sbjct:  471 RDAKLALYRSLLKPMRAVLGDDHPAYAELLIEIADWSEPASEQTLEQAETATGIYEKNSWHQTPEYARALRIVGRIRNTLRRDDAIEALLKAEGVLKEQRLTSGIDYLITLNELLFYYRNHDQLIEAIPYCETAEELARQLLKVDRGLVAQTCNQVATIYETLGRTDEALENYLRAVNFFDELSGPPSRAQLITLKNVAGLYRRQQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVLGLTSMYQEQERYQQAR 724
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BLAST of mRNA_M-pyrifera_M_contig92234.21351.1 vs. uniprot
Match: A0A3C0AFN6_9PLAN (CHAT domain-containing protein (Fragment) n=4 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AFN6_9PLAN)

HSP 1 Score: 417 bits (1073), Expect = 1.840e-132
Identity = 214/254 (84.25%), Postives = 227/254 (89.37%), Query Frame = 0 
Query:    1 RDAKLALYRSLLKPMRAVLGDDHPAYAELLIEIADWSEPASEQTLEQAETATGIYEKNSWHQTPEYARALRIVGRIRNTLRRDDAIVALLKAEGVLKEQRLTSGIDYLITLNELLFYYRNHDQLIEAIPYCETAEELARQLLKVDRGLVAQTCNQVATIYETLGRTDEALENYLRAVNFFDELSGPPSRAQLITLKNVAGLYRRQQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVLGLTSMYQEQERYQQAR 254
            RD KL  Y+ LLKPM  VLGDDHP YAELLIEIADW+EPAS QTLEQAETA G+YE+NSWHQT EYA ALRIVGRIRNTLR D+AI ALLKAEGVLK  RLTSGI+YLIT+NELLFYYRN  QLIEAIPYCE AE+LARQLL  DRGL AQTCNQVATIYETLGRTDEAL+NYLRAVN FDEL+ PP+R  LITLKNVAGLYR+QQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVL LTSMYQEQERY +AR
Sbjct:  462 RDVKLTHYKLLLKPMSTVLGDDHPTYAELLIEIADWTEPASAQTLEQAETAIGVYEQNSWHQTWEYAHALRIVGRIRNTLRHDNAIDALLKAEGVLKALRLTSGIEYLITMNELLFYYRNTGQLIEAIPYCEIAEKLARQLLNADRGLAAQTCNQVATIYETLGRTDEALQNYLRAVNIFDELASPPTRGHLITLKNVAGLYRKQQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVLTLTSMYQEQERYDEAR 715
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BLAST of mRNA_M-pyrifera_M_contig92234.21351.1 vs. uniprot
Match: A0A2E2C280_9PLAN (CHAT domain-containing protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C280_9PLAN)

HSP 1 Score: 409 bits (1052), Expect = 3.620e-129
Identity = 211/254 (83.07%), Postives = 223/254 (87.80%), Query Frame = 0 
Query:    1 RDAKLALYRSLLKPMRAVLGDDHPAYAELLIEIADWSEPASEQTLEQAETATGIYEKNSWHQTPEYARALRIVGRIRNTLRRDDAIVALLKAEGVLKEQRLTSGIDYLITLNELLFYYRNHDQLIEAIPYCETAEELARQLLKVDRGLVAQTCNQVATIYETLGRTDEALENYLRAVNFFDELSGPPSRAQLITLKNVAGLYRRQQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVLGLTSMYQEQERYQQAR 254
            RD KL  Y+ LLKPM  VLGDDHP YAELLIEIADW+EPAS QTLEQAETA G+YE+NSWHQT EYA ALRIVG IRNTLR D+AI ALLKAEGVLK  RLTSGI+YLIT+NELLFYYRN  QLIEAIPYC  A  LARQLL  DRGL AQTCNQVATIYETLGRTDEAL+NYLRAVN FDEL+ PP+R  LITLKNVAGLYR+QQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVL LTSMYQEQERY +AR
Sbjct:  247 RDVKLTHYKLLLKPMSTVLGDDHPTYAELLIEIADWTEPASAQTLEQAETAIGVYEQNSWHQTWEYAHALRIVGXIRNTLRHDNAIDALLKAEGVLKALRLTSGIEYLITMNELLFYYRNTGQLIEAIPYCXXAXXLARQLLNADRGLAAQTCNQVATIYETLGRTDEALQNYLRAVNIFDELASPPTRXHLITLKNVAGLYRKQQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVLTLTSMYQEQERYDEAR 500
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BLAST of mRNA_M-pyrifera_M_contig92234.21351.1 vs. uniprot
Match: A0A355GG64_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355GG64_9PLAN)

HSP 1 Score: 139 bits (349), Expect = 3.270e-35
Identity = 69/79 (87.34%), Postives = 73/79 (92.41%), Query Frame = 0 
Query:  176 AVNFFDELSGPPSRAQLITLKNVAGLYRRQQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVLGLTSMYQEQERYQQAR 254
            AVN FDEL+ PP+R  LITLKNVAGLYR+QQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVL LTSMYQEQERY +AR
Sbjct:    1 AVNIFDELASPPTRGHLITLKNVAGLYRKQQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVLTLTSMYQEQERYDEAR 79
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92234.21351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2E7K748_9PLAN1.460e-15899.61CHAT domain-containing protein n=5 Tax=Gimesia Tax... [more]
A0A3C0AFN6_9PLAN1.840e-13284.25CHAT domain-containing protein (Fragment) n=4 Tax=... [more]
A0A2E2C280_9PLAN3.620e-12983.07CHAT domain-containing protein n=2 Tax=Planctomyce... [more]
A0A355GG64_9PLAN3.270e-3587.34Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 108..141
e-value: 200.0
score: 3.5
coord: 150..183
e-value: 0.12
score: 21.4
coord: 192..225
e-value: 88.0
score: 6.7
NoneNo IPR availablePFAMPF13424TPR_12coord: 153..223
e-value: 1.3E-11
score: 44.6
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 55..225
NoneNo IPR availablePANTHERPTHR45783:SF1KINESIN LIGHT CHAIN 3coord: 55..225
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 35..254
e-value: 1.2E-25
score: 92.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 106..253
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 150..254
score: 8.587

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92234contigM-pyrifera_M_contig92234:8..769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92234.21351.1mRNA_M-pyrifera_M_contig92234.21351.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig92234 8..769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig92234.21351.1 ID=prot_M-pyrifera_M_contig92234.21351.1|Name=mRNA_M-pyrifera_M_contig92234.21351.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
RDAKLALYRSLLKPMRAVLGDDHPAYAELLIEIADWSEPASEQTLEQAET
ATGIYEKNSWHQTPEYARALRIVGRIRNTLRRDDAIVALLKAEGVLKEQR
LTSGIDYLITLNELLFYYRNHDQLIEAIPYCETAEELARQLLKVDRGLVA
QTCNQVATIYETLGRTDEALENYLRAVNFFDELSGPPSRAQLITLKNVAG
LYRRQQQYVSAEDFFRRFLKMVETPGLYDRGLQVDAVLGLTSMYQEQERY
QQAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom