prot_M-pyrifera_M_contig9212.21332.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9212.21332.1
Unique Nameprot_M-pyrifera_M_contig9212.21332.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length256
Homology
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BLAST of mRNA_M-pyrifera_M_contig9212.21332.1 vs. uniprot
Match: A0A6H5K1P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P9_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 7.560e-16
Identity = 101/273 (37.00%), Postives = 123/273 (45.05%), Query Frame = 0 
Query:    1 LQNGELSAAARVFVPTHTSPAKPPMQPAGSTGTPGRRSRASSLGMAGLSS------AGTTPPRPPAAAHNSPALRPSPAKPGGSGLGL---PLGDRVFGSSWGSMSSGGGVGNANAVTSGADVAGLGGEGDTNAGGLWSTLGMDVGGT-VPPNGQTIWARSSLLDSALSGSVGA-----------GGDSMSLLLAPSTGSAVQATVDTPSMSSFAS--PLDLSPWGGXXXXXXXXXXXXXXGDDFAGSLSSSLGELQLDVSENKMVRSKSGGQ 250
            +QNGELSAAA+ FVP + SPAKP     G  GTP  R  A++   AG+ +      A  TPPR                            PL D  FGSSWGSM    G                          LW +LG+DVGG  VPP+GQ IW  SSLLDS + G  G             GD +SLLL PS  S VQA  D  S+  F+S  PLDL+ WG               GD+F G L+SSL  L +D S + ++  K+G Q
Sbjct: 1348 VQNGELSAAAQEFVP-NISPAKPATSTGG--GTPVSRPGAAAARSAGVETPTAVARAAQTPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLADVAFGSSWGSM----GXXXXXXXXXXXXXXXXXXXXXXXXSNLWGSLGIDVGGAGVPPSGQAIWGSSSLLDS-VGGDGGXXXXXXXXXXAIAGDGLSLLLGPSNVSTVQAPADATSLPPFSSSCPLDLASWG----VGRRGGAGALAGDEFVGGLASSLSGLSMDDSASGVLGGKAGEQ 1608
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9212.21332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1P9_9PHAE7.560e-1637.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9212contigM-pyrifera_M_contig9212:5586..6353 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9212.21332.1mRNA_M-pyrifera_M_contig9212.21332.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9212 5586..6353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9212.21332.1 ID=prot_M-pyrifera_M_contig9212.21332.1|Name=mRNA_M-pyrifera_M_contig9212.21332.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
LQNGELSAAARVFVPTHTSPAKPPMQPAGSTGTPGRRSRASSLGMAGLSS
AGTTPPRPPAAAHNSPALRPSPAKPGGSGLGLPLGDRVFGSSWGSMSSGG
GVGNANAVTSGADVAGLGGEGDTNAGGLWSTLGMDVGGTVPPNGQTIWAR
SSLLDSALSGSVGAGGDSMSLLLAPSTGSAVQATVDTPSMSSFASPLDLS
PWGGGGGGRGVGGAAAAAGDDFAGSLSSSLGELQLDVSENKMVRSKSGGQ
QQQQQR
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