prot_M-pyrifera_M_contig92103.21324.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig92103.21324.1
Unique Nameprot_M-pyrifera_M_contig92103.21324.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length185
Homology
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BLAST of mRNA_M-pyrifera_M_contig92103.21324.1 vs. uniprot
Match: A0A812LQD8_9DINO (CEP290 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812LQD8_9DINO)

HSP 1 Score: 58.9 bits (141), Expect = 7.910e-7
Identity = 42/101 (41.58%), Postives = 55/101 (54.46%), Query Frame = 0 
Query:   19 PILRRRYNLMRDEAEEARRAQARAESAAVDAEATLRHRVLSLELWKAGALARLKRLQAIAKDAVPAKLHAAVVSQVTSARSQLAKAVAEEASLRAELATQR 119
            P LRRR  +  ++      A+  AE AA +AEATLR R+L LELWK GA  RL+RL   A   VPA+LH   +  +   R +    VA+  + RA  A  R
Sbjct:  989 PALRRRLAVAEEQTRGQALAREAAEDAAAEAEATLRQRLLYLELWKRGAERRLQRLSDAATKWVPAELHRVALDSLAELRKRHHALVADVGATRAAAAADR 1089
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92103.21324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A812LQD8_9DINO7.910e-741.58CEP290 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..52
NoneNo IPR availableCOILSCoilCoilcoord: 134..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92103contigM-pyrifera_M_contig92103:1..555 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92103.21324.1mRNA_M-pyrifera_M_contig92103.21324.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig92103 1..555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig92103.21324.1 ID=prot_M-pyrifera_M_contig92103.21324.1|Name=mRNA_M-pyrifera_M_contig92103.21324.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
RSALRRITLSTATLEGENPILRRRYNLMRDEAEEARRAQARAESAAVDAE
ATLRHRVLSLELWKAGALARLKRLQAIAKDAVPAKLHAAVVSQVTSARSQ
LAKAVAEEASLRAELATQRAAALLRSDAEATAKLTSVELQAARASERAAR
AEIEELRAAISPSTTSSSTPSVAQLQGTIARLRGE
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