prot_M-pyrifera_M_contig9199.21297.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9199.21297.1
Unique Nameprot_M-pyrifera_M_contig9199.21297.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length55
Homology
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BLAST of mRNA_M-pyrifera_M_contig9199.21297.1 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 5.870e-14
Identity = 32/55 (58.18%), Postives = 45/55 (81.82%), Query Frame = 0 
Query:    1 MTFHKPEVVRIADNFIVDNQFNDEPVTGCTLGYVQEG-TTLVGFEFDDVCVEDTV 54
            +TF KPEVVRI+DN ++ N++N +P+TGC+L YV+   TT+VGF+FDD+C E TV
Sbjct:  342 VTFEKPEVVRISDNTLLANEYNPDPITGCSLAYVEGNETTVVGFDFDDICQEVTV 396
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9199.21297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHY2_ECTSI5.870e-1458.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9199contigM-pyrifera_M_contig9199:5415..6638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9199.21297.1mRNA_M-pyrifera_M_contig9199.21297.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9199 5315..6651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9199.21297.1 ID=prot_M-pyrifera_M_contig9199.21297.1|Name=mRNA_M-pyrifera_M_contig9199.21297.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp
MTFHKPEVVRIADNFIVDNQFNDEPVTGCTLGYVQEGTTLVGFEFDDVCV
EDTV*
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