prot_M-pyrifera_M_contig9190.21282.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig9190.21282.1
Unique Name	prot_M-pyrifera_M_contig9190.21282.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	107

Homology

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BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: D7G7A6_ECTSI (GTP-binding nuclear protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7A6_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 2.700e-67
Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0

Query:    1 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFIIKQEDQ 106
            MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGD NLQFVEQPALQPPEF+I Q DQ
Sbjct:   86 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDANLQFVEQPALQPPEFVINQADQ 191

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BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A835YR82_9STRA (GTP-binding nuclear protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR82_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.660e-60
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0

Query:    1 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFIIKQEDQQ 107
            MFDVTSRITYKNVP WHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KLVGDPNL FVEQPAL PPEF + + D Q
Sbjct:   85 MFDVTSRITYKNVPYWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLMFVEQPALAPPEFQLDKADVQ 191

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BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A448Z215_9STRA (GTP-binding nuclear protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z215_9STRA)

HSP 1 Score: 188 bits (478), Expect = 6.030e-60
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0

Query:    1 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEF 99
            MFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD  L FVE PALQPPEF
Sbjct:    1 MFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVEAPALQPPEF 99

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BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A2B4S4I9_STYPI (GTP-binding nuclear protein n=4 Tax=Scleractinia TaxID=6125 RepID=A0A2B4S4I9_STYPI)

HSP 1 Score: 191 bits (485), Expect = 3.930e-59
Identity = 90/104 (86.54%), Postives = 98/104 (94.23%), Query Frame = 0

Query:    1 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFIIKQE 104
            MFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK ITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KLVGDPNL+FVE PAL+PPE  + Q+
Sbjct:  139 MFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALEPPEVQVDQQ 242

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BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A0X3PW66_SCHSO (GTP-binding nuclear protein n=4 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A0X3PW66_SCHSO)

HSP 1 Score: 189 bits (479), Expect = 6.390e-59
Identity = 88/99 (88.89%), Postives = 95/99 (95.96%), Query Frame = 0

Query:    1 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEF 99
            MFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK ITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL+GDPNL+FVE PAL+PPE 
Sbjct:   86 MFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVEMPALKPPEL 184

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BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A3R7BYG7_CLOSI (GTP-binding nuclear protein n=8 Tax=Digenea TaxID=6179 RepID=A0A3R7BYG7_CLOSI)

HSP 1 Score: 189 bits (479), Expect = 6.600e-59
Identity = 88/101 (87.13%), Postives = 96/101 (95.05%), Query Frame = 0

Query:    1 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFII 101
            MFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+I+DRKVKAK ITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KLVGDPNL+FVE PA+QPPE  +
Sbjct:   87 MFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIQDRKVKAKSITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVEMPAIQPPELTM 187

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BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A2F0BDK6_ESCRO (GTP-binding nuclear protein Ran (Fragment) n=1 Tax=Eschrichtius robustus TaxID=9764 RepID=A0A2F0BDK6_ESCRO)

HSP 1 Score: 186 bits (471), Expect = 6.820e-59
Identity = 87/101 (86.14%), Postives = 94/101 (93.07%), Query Frame = 0

Query:    1 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFII 101
            MFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK I FHRKKNLQYYDISAKSNYNFEKPFLWLA+KL+GDPNL+FV  PAL PPE I+
Sbjct:    1 MFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVIM 101

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BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A7SG05_NEMVE (GTP-binding nuclear protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SG05_NEMVE)

HSP 1 Score: 189 bits (479), Expect = 7.020e-59
Identity = 89/98 (90.82%), Postives = 95/98 (96.94%), Query Frame = 0

Query:    1 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPE 98
            MFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK ITFHRKKNLQYYD+SAKSNYNFEKPFLWLA+KLVGDPNL+FVE PALQPPE
Sbjct:   89 MFDVTSRVTYKNVPNWHRDLERVCENIPIVLCGNKVDIKDRKVKAKAITFHRKKNLQYYDLSAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALQPPE 186

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BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A1E7FMC8_9STRA (GTP-binding nuclear protein n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A1E7FMC8_9STRA)

HSP 1 Score: 188 bits (478), Expect = 9.360e-59
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0

Query:    1 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEF 99
            MFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD  L FVE PALQPPEF
Sbjct:   87 MFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVEAPALQPPEF 185

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BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: B4DV51_HUMAN (GTP-binding nuclear protein Ran n=32 Tax=Opisthokonta TaxID=33154 RepID=B4DV51_HUMAN)

HSP 1 Score: 185 bits (470), Expect = 9.680e-59
Identity = 86/101 (85.15%), Postives = 94/101 (93.07%), Query Frame = 0

Query:    1 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFII 101
            MFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK I FHRKKNLQYYDISAKSNYNFEKPFLWLA+KL+GDPNL+FV  PAL PPE ++
Sbjct:    1 MFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVM 101

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7A6_ECTSI	2.700e-67	96.23	GTP-binding nuclear protein n=2 Tax=Ectocarpus Tax...	[more]
A0A835YR82_9STRA	3.660e-60	88.79	GTP-binding nuclear protein n=2 Tax=Tribonema minu...	[more]
A0A448Z215_9STRA	6.030e-60	92.93	GTP-binding nuclear protein n=1 Tax=Pseudo-nitzsch...	[more]
A0A2B4S4I9_STYPI	3.930e-59	86.54	GTP-binding nuclear protein n=4 Tax=Scleractinia T...	[more]
A0A0X3PW66_SCHSO	6.390e-59	88.89	GTP-binding nuclear protein n=4 Tax=Diphyllobothri...	[more]
A0A3R7BYG7_CLOSI	6.600e-59	87.13	GTP-binding nuclear protein n=8 Tax=Digenea TaxID=...	[more]
A0A2F0BDK6_ESCRO	6.820e-59	86.14	GTP-binding nuclear protein Ran (Fragment) n=1 Tax...	[more]
A7SG05_NEMVE	7.020e-59	90.82	GTP-binding nuclear protein n=1 Tax=Nematostella v...	[more]
A0A1E7FMC8_9STRA	9.360e-59	92.93	GTP-binding nuclear protein n=19 Tax=Ochrophyta Ta...	[more]
B4DV51_HUMAN	9.680e-59	85.15	GTP-binding nuclear protein Ran n=32 Tax=Opisthoko...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 3..24 score: 84.62 coord: 77..99 score: 64.05 coord: 39..57 score: 83.4
IPR002041	Ran GTPase	PANTHER	PTHR24071	FAMILY NOT NAMED	coord: 1..101
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 1..80 score: 12.348
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 1..107 e-value: 1.4E-36 score: 137.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..83 e-value: 0.0036 score: -70.1
None	No IPR available	GENE3D	3.40.50.300		coord: 1..107 e-value: 6.3E-28 score: 99.3
None	No IPR available	PANTHER	PTHR24071:SF17	GTP-BINDING NUCLEAR PROTEIN RAN	coord: 1..101
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 1..80 e-value: 1.2E-18 score: 67.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..100

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig9190	contig	M-pyrifera_M_contig9190:8195..9845 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig9190.21282.1	mRNA_M-pyrifera_M_contig9190.21282.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig9190 8195..9853 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig9190.21282.1 ID=prot_M-pyrifera_M_contig9190.21282.1|Name=mRNA_M-pyrifera_M_contig9190.21282.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITF
HRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFI
IKQEDQQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002041	Ran_GTPase
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase