mRNA_M-pyrifera_M_contig9190.21282.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: D7G7A6_ECTSI (GTP-binding nuclear protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7A6_ECTSI) HSP 1 Score: 213 bits (542), Expect = 1.780e-68 Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 3 Query: 3 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFIIKQEDQ 326 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGD NLQFVEQPALQPPEF+I Q DQ Sbjct: 84 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDANLQFVEQPALQPPEFVINQADQ 191
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A835YR82_9STRA (GTP-binding nuclear protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR82_9STRA) HSP 1 Score: 195 bits (495), Expect = 2.420e-61 Identity = 97/109 (88.99%), Postives = 101/109 (92.66%), Query Frame = 3 Query: 3 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFIIKQEDQQ 329 IIMFDVTSRITYKNVP WHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KLVGDPNL FVEQPAL PPEF + + D Q Sbjct: 83 IIMFDVTSRITYKNVPYWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLMFVEQPALAPPEFQLDKADVQ 191
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A2B4S4I9_STYPI (GTP-binding nuclear protein n=4 Tax=Scleractinia TaxID=6125 RepID=A0A2B4S4I9_STYPI) HSP 1 Score: 194 bits (493), Expect = 2.620e-60 Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 3 Query: 3 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFIIKQE 320 IIMFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK ITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KLVGDPNL+FVE PAL+PPE + Q+ Sbjct: 137 IIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALEPPEVQVDQQ 242
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A0X3PW66_SCHSO (GTP-binding nuclear protein n=4 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A0X3PW66_SCHSO) HSP 1 Score: 192 bits (487), Expect = 4.230e-60 Identity = 90/101 (89.11%), Postives = 97/101 (96.04%), Query Frame = 3 Query: 3 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEF 305 IIMFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK ITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL+GDPNL+FVE PAL+PPE Sbjct: 84 IIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVEMPALKPPEL 184
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A3R7BYG7_CLOSI (GTP-binding nuclear protein n=8 Tax=Digenea TaxID=6179 RepID=A0A3R7BYG7_CLOSI) HSP 1 Score: 192 bits (487), Expect = 4.360e-60 Identity = 90/103 (87.38%), Postives = 98/103 (95.15%), Query Frame = 3 Query: 3 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFII 311 IIMFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+I+DRKVKAK ITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KLVGDPNL+FVE PA+QPPE + Sbjct: 85 IIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIQDRKVKAKSITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVEMPAIQPPELTM 187
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A7SG05_NEMVE (GTP-binding nuclear protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SG05_NEMVE) HSP 1 Score: 192 bits (487), Expect = 4.640e-60 Identity = 91/100 (91.00%), Postives = 97/100 (97.00%), Query Frame = 3 Query: 3 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPE 302 IIMFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK ITFHRKKNLQYYD+SAKSNYNFEKPFLWLA+KLVGDPNL+FVE PALQPPE Sbjct: 87 IIMFDVTSRVTYKNVPNWHRDLERVCENIPIVLCGNKVDIKDRKVKAKAITFHRKKNLQYYDLSAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALQPPE 186
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A1E7FMC8_9STRA (GTP-binding nuclear protein n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A1E7FMC8_9STRA) HSP 1 Score: 191 bits (486), Expect = 6.190e-60 Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 3 Query: 3 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEF 305 IIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD L FVE PALQPPEF Sbjct: 85 IIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVEAPALQPPEF 185
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: A0A448Z215_9STRA (GTP-binding nuclear protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z215_9STRA) HSP 1 Score: 188 bits (478), Expect = 6.550e-60 Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 3 Query: 9 MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEF 305 MFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD L FVE PALQPPEF Sbjct: 1 MFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVEAPALQPPEF 99
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: UPI0005F5702C (GTP-binding nuclear protein Ran isoform X2 n=1 Tax=Mandrillus leucophaeus TaxID=9568 RepID=UPI0005F5702C) HSP 1 Score: 188 bits (478), Expect = 7.950e-60 Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 3 Query: 3 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFII 311 IIMFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK I FHRKKNLQYYDISAKSNYNFEKPFLWLA+KL+GDPNL+FV PAL PPE ++ Sbjct: 6 IIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVM 108
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Match: B5XGS6_SALSA (GTP-binding nuclear protein Ran n=16 Tax=Protacanthopterygii TaxID=41705 RepID=B5XGS6_SALSA) HSP 1 Score: 191 bits (485), Expect = 8.250e-60 Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 3 Query: 3 IIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFII 311 IIMFDVTSR+TYKNVPNWHRDL RVCE+IPIVLCGNKV+IKDRKVKAK I FHRKKNLQYYDISAKSNYNFEKPFLWLA+KLVGDPNL+FVE PAL PPE ++ Sbjct: 84 IIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALAPPEVVM 186 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9190.21282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9190.21282.1 >prot_M-pyrifera_M_contig9190.21282.1 ID=prot_M-pyrifera_M_contig9190.21282.1|Name=mRNA_M-pyrifera_M_contig9190.21282.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp MFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFback to top mRNA from alignment at M-pyrifera_M_contig9190:8195..9853- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9190.21282.1 ID=mRNA_M-pyrifera_M_contig9190.21282.1|Name=mRNA_M-pyrifera_M_contig9190.21282.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1659bp|location=Sequence derived from alignment at M-pyrifera_M_contig9190:8195..9853- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9190:8195..9853- >mRNA_M-pyrifera_M_contig9190.21282.1 ID=mRNA_M-pyrifera_M_contig9190.21282.1|Name=mRNA_M-pyrifera_M_contig9190.21282.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig9190:8195..9853- (Macrocystis pyrifera P11B4 male)back to top |