prot_M-pyrifera_M_contig91700.21243.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig91700.21243.1
Unique Nameprot_M-pyrifera_M_contig91700.21243.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length110
Homology
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Match: L8HI25_ACACA (Ras-related protein Rab n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HI25_ACACA)

HSP 1 Score: 96.7 bits (239), Expect = 1.340e-22
Identity = 49/109 (44.95%), Postives = 69/109 (63.30%), Query Frame = 0
Query:    1 WKHEVDSKVKLPGEAPLPVVLVANKCDLADRAIDTAILDDYCREHGFAGWIETSAKENIRVEASITTLVKEVLKHPEAFAAQKAAKEARARDEAAVSLGGADASAGGCC 109
            WK ++D+KV+LP   PLPV+L+ANKCD+   A++  ++D YC+E+GF  W  TSAKEN  ++ S+  +V  V+K  E  A  K   EA A +EA  S      S+GGCC
Sbjct:  112 WKDDIDNKVRLPNGDPLPVILLANKCDMVKTALNEEVMDQYCKENGFISWFATSAKENTNIDESVACIVNHVIKKDEQGA--KGDAEAFALNEAGPST---RPSSGGCC 215          
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Match: L8HAC7_ACACA (Ras-related protein Rab n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HAC7_ACACA)

HSP 1 Score: 92.4 bits (228), Expect = 6.390e-21
Identity = 52/117 (44.44%), Postives = 73/117 (62.39%), Query Frame = 0
Query:    1 WKHEVDSKVKLP-GEAPLPVVLVANKCDLADR--AIDTAILDDYCREHGFAGWIETSAKENIRVEASITTLVKEVLKHPEAFAAQKAAKEARARDEAAVSLGGAD-----ASAGGCC 109
            WK+++D+KV LP  + P+PVVL+ANKCDLA    A + A +D YC EHGFAGW ETSAKENI ++ ++  LV ++L++           + + +DE  V +G        A AGGCC
Sbjct:  108 WKNDIDNKVTLPPDDRPIPVVLLANKCDLAKEGFARNAAQMDKYCEEHGFAGWEETSAKENINIDKAVKFLVSKILEND-----INRQNQLQKKDENIVKVGAGGPEPKKAGAGGCC 219          
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Match: A0A1V9YVF5_9STRA (Ras-related protein Rab n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YVF5_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.570e-20
Identity = 42/79 (53.16%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    1 WKHEVDSKVKLPGEAPLPVVLVANKCDLADRAIDTAILDDYCREHGFAGWIETSAKENIRVEASITTLVKEVLKHPEAF 79
            WK E+D+KV+LP + PLPV+L  NKCDLA   ID A LD +C  +GFAGW ETSAKEN  ++ +   LV  +L H + F
Sbjct:  106 WKKEIDTKVELPNKKPLPVILCGNKCDLASD-IDRAFLDGFCETNGFAGWFETSAKENTNIDEANKALVAAILAHRDVF 183          
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Match: A0A8K1C4T0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4T0_PYTOL)

HSP 1 Score: 91.3 bits (225), Expect = 1.710e-20
Identity = 52/114 (45.61%), Postives = 69/114 (60.53%), Query Frame = 0
Query:    1 WKHEVDSKVKLPGEAPLPVVLVANKCDLADRAIDTAILDDYCREHGFAGWIETSAKENIRVEASITTLVKEVLKHPEAFA----AQKAAKEAR-ARDEAAVSLGGADASAGGCC 109
            WK E+DSKV+LP   PLPV+L  NKCDL+   +D A LD +C  +GFAGW ETSAKEN  ++ +   LV  +L+H + F     AQ  A   R + ++AA S     AS+  CC
Sbjct:  107 WKKEIDSKVELPNNKPLPVILCGNKCDLSGD-VDRAFLDAFCETNGFAGWFETSAKENKNIDEAAKALVSSILEHRDIFERKTDAQNRANTIRPSHNDAAAS----SASSSWCC 215          
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Match: A0A7S2S186_9STRA (Ras-related protein Rab n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S186_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.820e-20
Identity = 40/80 (50.00%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    1 WKHEVDSKVKLPGEAPLPVVLVANKCDLADRAIDTAILDDYCREHGFAGWIETSAKENIRVEASITTLVKEVLKHPEAFA 80
            WK E+D+KV LP   PLPVVL+ANKCD+    ID+  LD +C EHGF  W ETSAK + +++A+   L++ +L+H + FA
Sbjct:  102 WKGEIDAKVVLPNHEPLPVVLLANKCDIEGVKIDSDALDKFCEEHGFIAWFETSAKTDHKIDAAARFLLENILEHEDIFA 181          
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Match: F0YEW4_AURAN (Ras-related protein Rab (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEW4_AURAN)

HSP 1 Score: 89.7 bits (221), Expect = 2.720e-20
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    1 WKHEVDSKVKLPGEAPLPVVLVANKCDLADRAIDTAILDDYCREHGFAGWIETSAKENIRVEAS 64
            WK E+DSKV LP    LPVVL+ANKCDL D AID   LDD+CR HGF GW ETSAK ++ ++ +
Sbjct:  112 WKDEIDSKVHLPNGMALPVVLLANKCDLEDVAIDRQELDDFCRSHGFIGWFETSAKADVNIDTA 175          
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Match: A0A814I8K4_9BILA (Ras-related protein Rab n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814I8K4_9BILA)

HSP 1 Score: 90.9 bits (224), Expect = 3.020e-20
Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    1 WKHEVDSKVKLPGEAPLPVVLVANKCDLADRAI--DTAILDDYCREHGFAGWIETSAKENIRVEASITTLVKEVLKHPEAFAAQKAAKEARARDEAAVSLGGADASAGGCC 109
            WK+++D KV+LP   P+P VL+ANKCDLA   +  +T  +D++CRE GF  W ETSAKEN+ +EA+   L+ E++KH E    Q   K  R+ D   V       S  GCC
Sbjct:  122 WKNDLDIKVQLPDGNPVPCVLLANKCDLAKEGLVNNTTQMDEFCREKGFCKWFETSAKENVNIEAAANYLLGEIMKHTE----QIQQKPQRSSDAITVDQEPKTNSKKGCC 228          
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Match: UPI001CFC2F3D (ras-related protein Rab-32 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFC2F3D)

HSP 1 Score: 90.1 bits (222), Expect = 4.310e-20
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    1 WKHEVDSKVKLPGEAPLPVVLVANKCDLADRAIDTAILDDYCREHGFAGWIETSAKENIRVEASITTLVKEVL 73
            WK+++DSKVKLP  +P+P VL+ANKCD  D   +   +DD+C+E+GFAGW ETSAKEN  +E +   LV+ +L
Sbjct:  109 WKNDLDSKVKLPDGSPVPAVLLANKCDQKDGTKNDVSMDDFCKENGFAGWFETSAKENRNIEEATRFLVENIL 181          
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Match: A0A1V9YUT9_9STRA (Ras-related protein Rab n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YUT9_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 4.690e-20
Identity = 40/79 (50.63%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    1 WKHEVDSKVKLPGEAPLPVVLVANKCDLADRAIDTAILDDYCREHGFAGWIETSAKENIRVEASITTLVKEVLKHPEAF 79
            WK E+D+KV+LP + PLPV+L  NKCDLA   +D A LD++C  +GFAGW +TSAKEN  ++ +   LV  +L H + F
Sbjct:  108 WKKEIDTKVELPNKKPLPVILCGNKCDLAGE-VDRAFLDEFCETNGFAGWFDTSAKENKNIDEANKALVAAILAHRDIF 185          
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Match: S4R5C5_PETMA (Ras-related protein Rab n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4R5C5_PETMA)

HSP 1 Score: 90.1 bits (222), Expect = 4.780e-20
Identity = 44/78 (56.41%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    1 WKHEVDSKVKLPGEAPLPVVLVANKCD-----LADRAIDTAILDDYCREHGFAGWIETSAKENIRVEASITTLVKEVL 73
            WKH++DSKV LP   P+P VL+ANKCD           DTA LD YCR+ GF GW ETSAKENI VEA+   LV+ +L
Sbjct:  107 WKHDLDSKVTLPSGKPIPTVLLANKCDGDGGDARGEWSDTAQLDRYCRDEGFVGWFETSAKENINVEAAAQLLVQRIL 184          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91700.21243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8HI25_ACACA1.340e-2244.95Ras-related protein Rab n=1 Tax=Acanthamoeba caste... [more]
L8HAC7_ACACA6.390e-2144.44Ras-related protein Rab n=1 Tax=Acanthamoeba caste... [more]
A0A1V9YVF5_9STRA1.570e-2053.16Ras-related protein Rab n=3 Tax=Saprolegniaceae Ta... [more]
A0A8K1C4T0_PYTOL1.710e-2045.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2S186_9STRA1.820e-2050.00Ras-related protein Rab n=1 Tax=Rhizochromulina ma... [more]
F0YEW4_AURAN2.720e-2060.94Ras-related protein Rab (Fragment) n=1 Tax=Aureoco... [more]
A0A814I8K4_9BILA3.020e-2044.14Ras-related protein Rab n=1 Tax=Didymodactylos car... [more]
UPI001CFC2F3D4.310e-2053.42ras-related protein Rab-32 n=1 Tax=Protopterus ann... [more]
A0A1V9YUT9_9STRA4.690e-2050.63Ras-related protein Rab n=1 Tax=Thraustotheca clav... [more]
S4R5C5_PETMA4.780e-2056.41Ras-related protein Rab n=2 Tax=Petromyzon marinus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 15..28
score: 45.96
coord: 50..72
score: 33.93
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..75
e-value: 0.0062
score: -73.1
NoneNo IPR availableGENE3D3.40.50.300coord: 1..77
e-value: 1.6E-15
score: 59.0
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..97
NoneNo IPR availablePANTHERPTHR24073:SF897RAB38C, MEMBER OF RAS ONCOGENE FAMILY-RELATEDcoord: 1..97
NoneNo IPR availablePROSITEPS51419RABcoord: 1..109
score: 11.066
IPR001806Small GTPasePFAMPF00071Rascoord: 1..73
e-value: 6.6E-10
score: 38.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91700contigM-pyrifera_M_contig91700:416..745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91700.21243.1mRNA_M-pyrifera_M_contig91700.21243.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig91700 416..745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig91700.21243.1 ID=prot_M-pyrifera_M_contig91700.21243.1|Name=mRNA_M-pyrifera_M_contig91700.21243.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
WKHEVDSKVKLPGEAPLPVVLVANKCDLADRAIDTAILDDYCREHGFAGW
IETSAKENIRVEASITTLVKEVLKHPEAFAAQKAAKEARARDEAAVSLGG
ADASAGGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase