prot_M-pyrifera_M_contig9148.21201.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig9148.21201.1
Unique Name	prot_M-pyrifera_M_contig9148.21201.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	154

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig9148.21201.1 vs. uniprot
Match: D8LQ08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ08_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 2.580e-56
Identity = 104/151 (68.87%), Postives = 122/151 (80.79%), Query Frame = 0

Query:    1 MGRLNSLIKFVVVNANVLLFLGGVGIIVVVSLVLTADFAKLAEEYIRVRGVAMLVVGVLVTIMSIIGCMGTNRQIQRDRTWSGRRILSLYQLILVAVVVCQGIAQTRLYSIEARCLEEAAEGLPDEFGVLEGRLRSGFNEAYFDQLCAAES 151
            MG+LNS IKFVV NAN LLFLGGVGI++V SL+L ADF KLA+ Y++  G+  ++VG+LV  MSIIGC+GTNRQI+RDR WSGRRILSLYQLILVAVVV QG+ Q RLYSIE   LEEAA  LP + G  EGR R GFNEAYF+QLC+A +
Sbjct:    1 MGKLNSFIKFVVFNANALLFLGGVGIVIVASLLLAADFIKLAQTYMQTLGIITMMVGILVAAMSIIGCVGTNRQIERDRLWSGRRILSLYQLILVAVVVGQGVVQMRLYSIEVS-LEEAAADLPIQHGEFEGRFREGFNEAYFEQLCSASA 150

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BLAST of mRNA_M-pyrifera_M_contig9148.21201.1 vs. uniprot
Match: A0A812W7H9_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W7H9_SYMMI)

HSP 1 Score: 73.9 bits (180), Expect = 8.450e-13
Identity = 47/148 (31.76%), Postives = 84/148 (56.76%), Query Frame = 0

Query:    1 MGRLNSLIKFVVVNANVLLFLGGVGIIVVVSLVLTADFAKLAEEYIRVRGVAMLVVGVLVTIMSIIGCMGTNRQIQRDRTWSGRRILSLYQLILVAVVVCQGIAQTRLYSIEARCLEEAAEGLPD-----EFGVLEGRLRSGFNEAYF 143
            MGRLN++IK++V+N N++     +  I++  LV+ +D+  L   +     + +++  VL+ ++S++GCMG + Q ++   W+GRRIL+LYQL L+A ++      T+L  I  R L+     L       ++G  E  +   FNE +F
Sbjct:    1 MGRLNNMIKWLVMNVNLIYAAVALVSIILAVLVMVSDWGSLDRGFFLGWCIVVILFSVLILMISLLGCMGVSHQSEQLSCWTGRRILALYQLSLLATIIGNLWMVTKLI-ILVRGLDATYSDLTSADDTVDYGRFEEAVADRFNEFFF 147

[Close]

BLAST of mRNA_M-pyrifera_M_contig9148.21201.1 vs. uniprot
Match: UPI00094E7C4C (23 kDa integral membrane protein-like isoform X1 n=3 Tax=Dendroctonus ponderosae TaxID=77166 RepID=UPI00094E7C4C)

HSP 1 Score: 54.3 bits (129), Expect = 8.880e-6
Identity = 37/108 (34.26%), Postives = 65/108 (60.19%), Query Frame = 0

Query:    1 MGRLNSLIKFVVVNANVLLFLGGVGIIVVVSLVLT--ADFAKLAEEYIRVRGVAMLVVGVLVTIMSIIGCMGTNRQIQRDRTWSGRRILSLYQLILVAVVVCQGIAQT 106
            MG    ++K V+   N+ L L G+GII+  +L+LT  ADF ++AE  +    VAM+V GVLVTI++ +GC+G  R+  +        +L+++ ++ + V +C  + +T
Sbjct:    1 MGVGVQMMKTVLFIFNIFLTLSGIGIIIAGALILTQMADFNRIAESDLVKMAVAMIVGGVLVTIVAFVGCLGAMRESYKLLMTFAGLLLAVF-IMELTVGICAAVFKT 107

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig9148.21201.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig9148.21201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LQ08_ECTSI	2.580e-56	68.87	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A812W7H9_SYMMI	8.450e-13	31.76	Hypothetical protein n=1 Tax=Symbiodinium microadr...	[more]
UPI00094E7C4C	8.880e-6	34.26	23 kDa integral membrane protein-like isoform X1 n...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 8..107 e-value: 4.7E-8 score: 33.0
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..66
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 105..153
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 67..86
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..34
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 87..104
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..45
None	No IPR available	TMHMM	TMhelix		coord: 13..35
None	No IPR available	TMHMM	TMhelix		coord: 45..67
None	No IPR available	TMHMM	TMhelix		coord: 86..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig9148	contig	M-pyrifera_M_contig9148:203..5719 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig9148.21201.1	mRNA_M-pyrifera_M_contig9148.21201.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig9148 203..5719 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig9148.21201.1 ID=prot_M-pyrifera_M_contig9148.21201.1|Name=mRNA_M-pyrifera_M_contig9148.21201.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp
MGRLNSLIKFVVVNANVLLFLGGVGIIVVVSLVLTADFAKLAEEYIRVRG
VAMLVVGVLVTIMSIIGCMGTNRQIQRDRTWSGRRILSLYQLILVAVVVC
QGIAQTRLYSIEARCLEEAAEGLPDEFGVLEGRLRSGFNEAYFDQLCAAE
SAW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018499	Tetraspanin/Peripherin