prot_M-pyrifera_M_contig90659.21018.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90659.21018.1
Unique Nameprot_M-pyrifera_M_contig90659.21018.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length202
Homology
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BLAST of mRNA_M-pyrifera_M_contig90659.21018.1 vs. uniprot
Match: A0A523PPR4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PPR4_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 7.190e-6
Identity = 59/202 (29.21%), Postives = 96/202 (47.52%), Query Frame = 0 
Query:    1 MSAIGRIFLVLNLILSALFVGWAAKVIKEEDSYRAQYQTAVADAEAAAEEAEEAQSALSAQLNTARAEEATVVSQRDDFEREVANLKEDLASERQRVAELESNVKTMTASLEGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARMTADTSRKGVEDELDQAQARIADLEMELTTAEKMVSRQSAQLATIVEEYNIDLSSI 202
            MS IGRIF+VLNL+LSA+F+G+A+  +     ++ Q++    + +   E  E     L+AQ+    +  +++  QRD F+ E+  LK D  +ER+R   L ++V  +  +L  +                    XXXXXXXX              +++L  A   I DLE++  T  K  +   AQL T+ E     L+ +
Sbjct:    1 MSPIGRIFIVLNLVLSAVFLGFASNNLASSQDFKGQFEDKRDEHDQYRETKEVELGDLTAQIAQLESSSSSLREQRDGFKAEMDRLKTDYETERRRNNTLNADVSAIKETLANYDETNRQNVQRLEQANSAVAEXXXXXXXXXXXXXXXXXXXXXXDEQLTAASKSIVDLEIDRETLRKANANLDAQLQTLAEATGTKLADL 202
[Close]
BLAST of mRNA_M-pyrifera_M_contig90659.21018.1 vs. uniprot
Match: A0A2D5ARZ1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5ARZ1_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 6.130e-5
Identity = 45/198 (22.73%), Postives = 88/198 (44.44%), Query Frame = 0 
Query:    1 MSAIGRIFLVLNLILSALFVGWAAKVIKEEDSYRAQYQTAVADAEAAAEEAEEAQSALSAQLNTARAEEATVVSQRDDFEREVANLKEDLASERQRVAELESNVKTMTASLEGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARMTADTSRKGVEDELDQAQARIADLEMELTTAEKMVSRQSAQLATIVEEYNID 198
            MS IGR+F+VLNL+L+A F+GWA+  +     Y+ Q +T  ++    A   +E  S L  ++     +      +RD  + +    + DLA+ ++    L +++  + ++L  +                            V A+  A+  R+  E+ L   + ++  L+   T  +  + RQ  Q+A ++EE  +D
Sbjct:    1 MSPIGRMFIVLNLVLAAAFLGWASNALSTVQDYKGQLETEKSEHNDTAAAKDEEISKLQIKMQNLEGDSGRFREERDLEKSQRERSEADLATAKRANETLSASLSKIESNLGDYKQLIEQFSSDKDNLAQLNAEATRAREDAVDAQQAAELQRRDAEEALLGVRGQVDVLQATNTDLQSKLKRQEVQIAILIEETGLD 198
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90659.21018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A523PPR4_9BACT7.190e-629.21Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D5ARZ1_9BACT6.130e-522.73Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..110
NoneNo IPR availableCOILSCoilCoilcoord: 153..187
NoneNo IPR availableCOILSCoilCoilcoord: 118..138
NoneNo IPR availableCOILSCoilCoilcoord: 34..68
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..202
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.875
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 36..190
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90659contigM-pyrifera_M_contig90659:180..785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90659.21018.1mRNA_M-pyrifera_M_contig90659.21018.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90659 180..785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90659.21018.1 ID=prot_M-pyrifera_M_contig90659.21018.1|Name=mRNA_M-pyrifera_M_contig90659.21018.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp
MSAIGRIFLVLNLILSALFVGWAAKVIKEEDSYRAQYQTAVADAEAAAEE
AEEAQSALSAQLNTARAEEATVVSQRDDFEREVANLKEDLASERQRVAEL
ESNVKTMTASLEGFRSTIESMEASKDAAVADAREAREARDEAVAARMTAD
TSRKGVEDELDQAQARIADLEMELTTAEKMVSRQSAQLATIVEEYNIDLS
SI
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