prot_M-pyrifera_M_contig90358.20949.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90358.20949.1
Unique Nameprot_M-pyrifera_M_contig90358.20949.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A061S2S3_9CHLO (Tubulin-folding cofactor B n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S2S3_9CHLO)

HSP 1 Score: 115 bits (289), Expect = 1.670e-29
Identity = 59/113 (52.21%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDG--DAMPKDLDGVEVGMRCEVFP 111
            C L DDS+KLGFYS  DG  +H+VDTDP SLS  G L+D S+VEKYVMSDE YD+R+GT R +K+E+ + DP++T  +    ++  G +D   + M  +  GV VG RCEVFP
Sbjct:   81 CSLEDDSRKLGFYSPYDGCTLHVVDTDPTSLSAQGWLEDTSKVEKYVMSDEAYDRRSGTFRKYKEERRREDPSWTLHRELAQRRGGGSQDAGPEHMAAEASGVGVGDRCEVFP 193          
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A5A8E4C2_CAFRO (CAP-Gly domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E4C2_CAFRO)

HSP 1 Score: 112 bits (280), Expect = 2.280e-27
Identity = 61/120 (50.83%), Postives = 78/120 (65.00%), Query Frame = 0
Query:    3 LADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAK-FQRMQKAQGKEDGDAMPK--DLD--------GVEVGMRCEVFP 111
            + DD K LGFY +  G RVH+VD DP SLS+ GGLDD+SQV+KYVMS+E+YDKR GTLRAWK+EQLK +P F ++       +A       A P+  D+D        G+EVG RC + P
Sbjct:   95 MLDDDKMLGFYGMTHGHRVHVVDHDPMSLSRGGGLDDVSQVKKYVMSEEDYDKREGTLRAWKREQLKKNPHFKYSDALPASGRAAAXXXXXAGPRAPDVDFEDDTLVEGIEVGARCSIRP 214          
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A2R5GFJ6_9STRA (Tubulin-folding cofactor B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFJ6_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.090e-26
Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDGDAMPKDLDGVEVGMRCEVFP 111
            C L DD+K LGFY +  G  +HI+DTDP+S SKDGGL+++  VEKYVMSDE+Y+KR  ++RA+KK+  + DP FT     R +    K       KD++G  VG RC++ P
Sbjct:   83 CELDDDTKMLGFYGVATGMNIHIIDTDPYSFSKDGGLENVDLVEKYVMSDEDYNKRENSIRAYKKKMREKDPYFTLLPENRREP---KNKNPPTEKDVEGFTVGDRCQIQP 190          
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A7S3DMQ9_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DMQ9_9EUKA)

HSP 1 Score: 107 bits (267), Expect = 4.660e-26
Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 0
Query:    3 LADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDGDAMPKDL----------DGVEVGMRCEVFP 111
            L DD+K LGFYS  +G  +H++D DPHSLSK GGLDD+SQV+KY MSDEEYDKR  T + +K++  + DPT+T      +QK   K +G  +P+ +          + + VG RC+V+P
Sbjct:  103 LNDDTKMLGFYSPQNGYYIHVIDNDPHSLSKKGGLDDVSQVKKYTMSDEEYDKRENTYKKYKEKMRETDPTWT------LQKEIAKRNGQPIPETINDPEFQKNEAEAIAVGKRCQVYP 215          
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A482S1V0_9ARCH (CAP-Gly domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1V0_9ARCH)

HSP 1 Score: 106 bits (265), Expect = 4.910e-26
Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 0
Query:    1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDGDAMPKDLDGVEVGMRCEVFP 111
            C + D+SK LGFYS+  GD +H++D DP+SLS++GGL D+S VEKY +SDE YDKR GT+R + +EQ K +P F  A      K   +  G   P+ ++G++VG RCEV P
Sbjct:   74 CEMPDESKMLGFYSVVSGDEIHVIDNDPYSLSRNGGLTDVSLVEKYKISDEAYDKRKGTVRDYIREQRKQNPNFKSAPV--TPKDPSEIPG---PESVEGIKVGDRCEVMP 179          
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A7S3GWA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWA4_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.810e-25
Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = 0
Query:    1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKE-DGDAM--------PKDLDGVEVGMRCEVFP 111
            C +ADD++ LGFYS+  G  +H++DTDP SLS+ GGL D+S +EKY M DE Y+KRAGT+R + +EQ K DPTF   K  +     GK+  GD          P+ + G+E GMR +V P
Sbjct:   85 CEMADDNRMLGFYSVKSGMEIHVIDTDPFSLSRGGGLTDVSLIEKYKMDDETYEKRAGTMREFIREQRKKDPTF---KLGQKNTTMGKQPSGDVTVTTQLPPGPESVAGIEGGMRGQVTP 201          
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A830HEM0_9CHLO (CAP-Gly domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HEM0_9CHLO)

HSP 1 Score: 104 bits (259), Expect = 6.790e-25
Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 0
Query:    1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQG-----KEDGDAMPKDLDGVEVGMRCEVFP 111
            CV+ D ++ LGFYS  DG  +H++DTDPHSLS  GGL+D+SQVEKYVMSD++Y+ R  T R +K+++L+ DPT+T  K   M + +G       D DA  ++     V  RCEV P
Sbjct:   99 CVMDDGARPLGFYSPLDGYVLHVIDTDPHSLSARGGLEDVSQVEKYVMSDDDYNNRENTYRKFKEDKLRKDPTWTLQK--EMAERRGVPVPEPTDPDAYVEEAKACTVDSRCEVSP 212          
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A7S2W9K5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9K5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 7.040e-25
Identity = 53/122 (43.44%), Postives = 76/122 (62.30%), Query Frame = 0
Query:    1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQ-----------KAQGKEDGDAMPKDLDGVEVGMRCEVFP 111
            C L+DDS+ LGFYS+  G  +HI+D DP+SLS+ GGL+D S +EKY MS++ YDKR GT+R W +EQ   DP +   K   M             A+ +E+    P+ ++G+++G RCEV P
Sbjct:   94 CELSDDSRMLGFYSVESGMTIHIIDEDPYSLSRGGGLEDTSLIEKYRMSEDTYDKRKGTVREWIREQKAKDPNWKPPKANMMTGNPWARQDPQAAAEPEEEVPVGPETVEGIKIGDRCEVMP 215          
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A7S2RYS7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RYS7_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.300e-24
Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = 0
Query:    1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDGDAMPKDLDGVEVGMRCEVFP 111
            CV+ DD+K LG+Y +  G  +HIVD DPHS SKDGGL++++ VEKYVMSDE+Y+KR   LR +KK+  + DP +TF    R +       G    K + G ++G RC++ P
Sbjct:  119 CVMDDDTKMLGYYGVTSGMNIHIVDMDPHSYSKDGGLENVNLVEKYVMSDEDYEKRENALRNYKKKMREKDPYWTFLPENRREPKNKNPPGPDSVKVISG-QIGERCQIQP 228          
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A5B8MIV5_9CHLO (Tubulin folding cofactor B n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MIV5_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 5.980e-24
Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 0
Query:    2 VLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKE------DGDAMPKDLDGVEVGMRCEVFP 111
             LADD+  LGFYS  DG  +H++D DP+S S DG L+D+S+V+KY +S+E+Y+ R  T R +K+++LK DPT+T  K   + K  GKE      D +   ++  GVEVG RCEV+P
Sbjct:   90 TLADDNTVLGFYSPQDGFTLHVIDIDPNSSSADGWLEDVSKVQKYEISEEDYNARENTYRKFKEQKLKEDPTWTLQK--EIAKRSGKEVKEAVNDPEFQAEEAKGVEVGNRCEVYP 203          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061S2S3_9CHLO1.670e-2952.21Tubulin-folding cofactor B n=1 Tax=Tetraselmis sp.... [more]
A0A5A8E4C2_CAFRO2.280e-2750.83CAP-Gly domain-containing protein n=2 Tax=Cafeteri... [more]
A0A2R5GFJ6_9STRA1.090e-2647.75Tubulin-folding cofactor B n=1 Tax=Hondaea ferment... [more]
A0A7S3DMQ9_9EUKA4.660e-2646.22Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
A0A482S1V0_9ARCH4.910e-2648.65CAP-Gly domain-containing protein (Fragment) n=1 T... [more]
A0A7S3GWA4_9STRA2.810e-2546.67Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A830HEM0_9CHLO6.790e-2547.41CAP-Gly domain-containing protein n=1 Tax=Pycnococ... [more]
A0A7S2W9K5_9STRA7.040e-2543.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2RYS7_9STRA1.300e-2445.95Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A5B8MIV5_9CHLO5.980e-2446.55Tubulin folding cofactor B n=1 Tax=Chloropicon pri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 1..29
e-value: 2.4E-5
score: 26.6
NoneNo IPR availablePANTHERPTHR18916DYNACTIN 1-RELATED MICROTUBULE-BINDINGcoord: 6..109
NoneNo IPR availablePANTHERPTHR18916:SF6DYNACTIN SUBUNIT 1-RELATEDcoord: 6..109
IPR000626Ubiquitin domainPFAMPF14560Ubiquitin_2coord: 1..30
e-value: 1.9E-6
score: 28.2
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 3..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90358contigM-pyrifera_M_contig90358:2..514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90358.20949.1mRNA_M-pyrifera_M_contig90358.20949.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90358 2..514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90358.20949.1 ID=prot_M-pyrifera_M_contig90358.20949.1|Name=mRNA_M-pyrifera_M_contig90358.20949.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSD
EEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDGDAMPKDLDG
VEVGMRCEVFP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf