prot_M-pyrifera_M_contig90197.20907.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig90197.20907.1
Unique Name	prot_M-pyrifera_M_contig90197.20907.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	149

Homology

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BLAST of mRNA_M-pyrifera_M_contig90197.20907.1 vs. uniprot
Match: UPI001E1DFF54 (uncharacterized protein LOC123556827 isoform X1 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFF54)

HSP 1 Score: 60.1 bits (144), Expect = 1.080e-7
Identity = 46/167 (27.54%), Postives = 81/167 (48.50%), Query Frame = 0

Query:    2 RSEWHAKAIRKYLEGTNLLFSQLPFAAREILVEAASHEVFRPGEVVVRQKERVTESSRFYIILSGRVGVFV--KESDGGDGXXXXXGGDVKDVV-----------------GKLVAVLDPGAAVGEKAMLEHAGVRTATLLAQEHTDMVAVVRDDFLRAMAISVAQQ 149
            R ++  + +  +L   + +FS L     + +V   S   FR  +++++Q E       FYIIL+G++ +++  K+ DGG G     G D K  +                 G  V  L  G   GE A++ +  VRTAT++A+E TD++ V R  + RA+   +A++
Sbjct:   19 RQDFEIQGLLPWLRKKSKIFSTLKTDYLKDIVRNCSLGKFRKDDIIIKQGEI---GDCFYIILAGKISIYILNKDKDGGSG-----GSDEKSAISSIGTLNKDGELDRSKLGNFVTSLGSGFPFGEVALVSNDAVRTATIVAEEETDLLVVDRALYNRAVRDVLAEE 177

[Close]

BLAST of mRNA_M-pyrifera_M_contig90197.20907.1 vs. uniprot
Match: K1Q5I1_CRAGI (cAMP-dependent protein kinase regulatory subunit n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1Q5I1_CRAGI)

HSP 1 Score: 55.8 bits (133), Expect = 3.160e-6
Identity = 41/158 (25.95%), Postives = 79/158 (50.00%), Query Frame = 0

Query:    2 RSEWHAKAIRKYLEGTNLLFSQLPFAAREILVEAASHEVFRPGEVVVRQKERVTESSRFYIILSGRVGVFV--KESDGGD--------GXXXXXGGDVKDVVGKLVAVLDPGAAVGEKAMLEHAGVRTATLLAQEHTDMVAVVRDDFLRAMAISVAQQ 149
            R ++  + +  +L   + LFSQL     + ++       F   +++++Q +   +   FY+IL G++ ++V  K+S+ GD        G     G   +  +G  V  L  G   G+ A++    VRTAT++A+E TD++ V R  + RA+   +A++
Sbjct:   19 RQDFEIQTLMPWLRKQSQLFSQLRTEYLKDIIRNCGQVTFNKDDIIIKQGD---QGDCFYMILGGKISIYVLNKKSEEGDETVPLEQIGTLNEKGQLDRSKLGIFVTHLGTGVPFGDVALMSEDCVRTATIIAEEVTDLLVVDRALYNRAVKEVLAKE 173

[Close]

BLAST of mRNA_M-pyrifera_M_contig90197.20907.1 vs. uniprot
Match: A0A7I8VJR4_9ANNE (DgyrCDS5387 n=2 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VJR4_9ANNE)

HSP 1 Score: 55.5 bits (132), Expect = 3.920e-6
Identity = 40/142 (28.17%), Postives = 72/142 (50.70%), Query Frame = 0

Query:    2 RSEWHAKAIRKYLEGTNLLFSQLPFAAREILVEAASHEVFRPGEVVVRQKERVTESSRFYIILSGRVGVFVKESDGGDGXXXXXGGDVKDVVGKLVAVLDPGAAVGEKAMLEHAGVRTATLLAQEHTDMVAVVRDDFLRAMA 143
            R+E   +A++ +    + L  ++       L++  +H + R  EVV+ Q E+      FYIIL G+V ++ KES   +G         +   G  +  L  G A GE A++    +RTA+++A E TD++ + R  + R++A
Sbjct:   19 RTEAEIQALQPWFTKKSQLLQKIKTDILSDLIKNCNHAIKRKDEVVILQGEK---GHCFYIILRGQVSIYNKESTE-EGQSTTDRESDRSKFGNFLVNLHDGNAFGEIALINPDCIRTASVIADETTDLIVIDRQLYNRSVA 156

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig90197.20907.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig90197.20907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
UPI001E1DFF54	1.080e-7	27.54	uncharacterized protein LOC123556827 isoform X1 n=...	[more]
K1Q5I1_CRAGI	3.160e-6	25.95	cAMP-dependent protein kinase regulatory subunit n...	[more]
A0A7I8VJR4_9ANNE	3.920e-6	28.17	DgyrCDS5387 n=2 Tax=Dimorphilus gyrociliatus TaxID...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000595	Cyclic nucleotide-binding domain	SMART	SM00100	cnmp_10	coord: 20..149 e-value: 0.0035 score: 26.6
IPR000595	Cyclic nucleotide-binding domain	PFAM	PF00027	cNMP_binding	coord: 40..143 e-value: 4.4E-12 score: 45.9
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 20..142 score: 15.278
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 1..147 e-value: 1.4E-21 score: 78.5
None	No IPR available	PANTHER	PTHR23011	UNCHARACTERIZED	coord: 21..142
IPR018488	Cyclic nucleotide-binding, conserved site	PROSITE	PS00889	CNMP_BINDING_2	coord: 106..124
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 17..143

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig90197	contig	M-pyrifera_M_contig90197:314..760 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig90197.20907.1	mRNA_M-pyrifera_M_contig90197.20907.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig90197 311..760 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig90197.20907.1 ID=prot_M-pyrifera_M_contig90197.20907.1|Name=mRNA_M-pyrifera_M_contig90197.20907.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
MRSEWHAKAIRKYLEGTNLLFSQLPFAAREILVEAASHEVFRPGEVVVRQ
KERVTESSRFYIILSGRVGVFVKESDGGDGGSEGSGGDVKDVVGKLVAVL
DPGAAVGEKAMLEHAGVRTATLLAQEHTDMVAVVRDDFLRAMAISVAQQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000595	cNMP-bd_dom
IPR014710	RmlC-like_jellyroll
IPR018488	cNMP-bd_CS
IPR018490	cNMP-bd-like