prot_M-pyrifera_M_contig90128.20890.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90128.20890.1
Unique Nameprot_M-pyrifera_M_contig90128.20890.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length133
Homology
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BLAST of mRNA_M-pyrifera_M_contig90128.20890.1 vs. uniprot
Match: A0A2P8W819_9CYAN (Uncharacterized protein n=1 Tax=filamentous cyanobacterium CCT1 TaxID=2107702 RepID=A0A2P8W819_9CYAN)

HSP 1 Score: 57.4 bits (137), Expect = 4.910e-7
Identity = 36/129 (27.91%), Postives = 64/129 (49.61%), Query Frame = 0 
Query:    2 RLALYSHLCKVEMRGSKAEWGVVLNVETKRCFAIPINDQLRFKATVELGLFAAVLKADREQKKTPIPVASP--CLNCRFGRPRPFIPSKSETVFFAEKISVYPHK--GHNGGLVHSDCGDKFEWLPPHR 126
            R+A Y  L + +  G  + +G++L   +    AI  N   R      L     V+K  +  ++ P P ++   C +C  G+P  + P +S+      +++  PH   G +G   HS+CGD+F+W+PPH+
Sbjct:  199 RMAAYCRLIE-KAEGGSSPYGIILFGNSYDGIAIANNQGSRSAFHKGLREARQVIKGKQRWERDPSPPSTGTICSSCPLGKPFTYRPGESDNR--PGRLNTSPHLAFGDDGRAYHSECGDRFQWIPPHQ 324
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BLAST of mRNA_M-pyrifera_M_contig90128.20890.1 vs. uniprot
Match: UPI000A905590 (hypothetical protein n=1 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922337 RepID=UPI000A905590)

HSP 1 Score: 53.5 bits (127), Expect = 1.160e-5
Identity = 41/132 (31.06%), Postives = 63/132 (47.73%), Query Frame = 0 
Query:    2 RLALYSHLCKVEMRGSKAEWGVVL-NVETKRCFAIPINDQLRFKATVELGLFAA---VLKADREQKKTPIPVASPCLNCRFGRPRPFIPSKSETVFFAEKISVYPHKGHNGGL----VHSDCGDKFEWLPPH 125
            R+A Y HL + ++ G ++ +G++L   E      +   +    +A    GL  A   V  A   Q  +P P    CLNC  G+P  F   + E+     +++  P   H  GL     HS+CGD+F+WLPPH
Sbjct:  251 RMAAYCHLLE-KVEGGRSPYGIILLGREVYEGITVSNREGSGSRAAFHKGLKEARHIVSSAKGGQTPSPPPNQRNCLNCPKGKP--FAYREGESNARTGRLNS-PVNFHISGLDRRPYHSECGDRFKWLPPH 378
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90128.20890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2P8W819_9CYAN4.910e-727.91Uncharacterized protein n=1 Tax=filamentous cyanob... [more]
UPI000A9055901.160e-531.06hypothetical protein n=1 Tax=Leptolyngbya sp. 'hen... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90128contigM-pyrifera_M_contig90128:370..768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90128.20890.1mRNA_M-pyrifera_M_contig90128.20890.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90128 370..789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90128.20890.1 ID=prot_M-pyrifera_M_contig90128.20890.1|Name=mRNA_M-pyrifera_M_contig90128.20890.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp
MRLALYSHLCKVEMRGSKAEWGVVLNVETKRCFAIPINDQLRFKATVELG
LFAAVLKADREQKKTPIPVASPCLNCRFGRPRPFIPSKSETVFFAEKISV
YPHKGHNGGLVHSDCGDKFEWLPPHRYWQSAE*
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