prot_M-pyrifera_M_contig89829.20826.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89829.20826.1
Unique Nameprot_M-pyrifera_M_contig89829.20826.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length238
Homology
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Match: A0A5A8CPR4_CAFRO (AMP-binding domain-containing protein n=8 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPR4_CAFRO)

HSP 1 Score: 170 bits (430), Expect = 1.080e-44
Identity = 95/246 (38.62%), Postives = 146/246 (59.35%), Query Frame = 0
Query:    1 MARATVLGSGLRRLTAAVPGTHVGLLAGNSVEWVEAELACRCFSLVTVILHAPSPAL--------LDAVLDAADVEVLICDRVWVPAILRHRRKRPSARLRAIVQTSSLYFEEMVQSHQAGVYLHAMPLVRAAGRAYPLQHIPPRPESLAHVSFAWDARLRPSLVLHSERALVSEALRLRSHPVIRTLTQADVHLSFLPLAFAPERTFLRLASRLGMSVALLPPQDLANLATRIAQARPTVISSTP 238
            +A AT LGSGL+ L +  PG  VG+L  NS EW+  ELAC C+SLV+V+LHAP            LD +L A+   V++CDR+W  AI+    +     LRAIVQTS+L ++E +Q+  + V L     V A GRAY + H PP P  L+ V++++ + +      H+  ++ +  LRLR+HP+ R++T+ DVH+S+L L    ER F+ L    G +V  +   +  +LA+ +A+ +PT++  TP
Sbjct: 1287 LAGATCLGSGLKGLASLAPGDRVGILGFNSKEWLLTELACSCYSLVSVVLHAPLSRSDSQRPLRHLDRMLRASGCAVIVCDRLWTTAIIEAAARDACPGLRAIVQTSALTYDEQIQASTSTVRLLPFEYVAATGRAYTMPHTPPDPRGLSTVTYSFSSDMDLMQTDHTHASVAAAVLRLRAHPLGRSVTRFDVHVSYLALVHEGERCFVHLLLACGAAVGFVGSAESGHLASTVARMQPTLLLVTP 1532          
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Match: UPI00106BDC75 (long-chain-fatty-acid--CoA ligase 1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BDC75)

HSP 1 Score: 76.6 bits (187), Expect = 2.000e-12
Identity = 70/245 (28.57%), Postives = 114/245 (46.53%), Query Frame = 0
Query:    3 RATVLGSGLRRLTA-AVPGTHVGLLAGNSVEWVEAELACRCFSLVTVILHAP-SPALLDAVLDAADVEVLICDRVWVPAILRHRRKRPSARLRAIVQTS-SLYFEEMVQSHQAGVYLHAMPLVRAAGRAYPLQHIPPRPESLAHVSFAWDARLRPSLVLHSERALVSE--ALRLRSHPVIRTLTQADVHLSFLPLAFAPERT----FLRLASRLGMSVALLPPQDLANLATRIAQARPTVISSTP 238
            RA   GSGLR L A A P T +G+ + N VEWV AE  C  FS+V V L+    P     +++ A + + +CD   V  +L++  +     L+ I++   S+  EE  ++ + GV +     V   GR    + + P  +SLA + +       P   + +   ++SE  A++        T+T  DVH+S+LPLA   ER         A+R+G         ++  +   +   RPT+  S P
Sbjct:  114 RALCFGSGLRELGAEAGPETFIGIYSQNKVEWVLAEQGCNRFSMVIVPLYDTLGPDACSFIINQARIAITVCDASKVDTLLKNVEQCKD--LKFIIKIGPSVTEEEQERAKKHGVEILTFNDVEEKGRKAKKEPVVPSRDSLATICYTSGTTGAPKGAMVTHANMISEVSAIQFILAKCGHTITNEDVHISYLPLAHMYERACHLMMFSNAARIGFFTG-----NVRKITEDLKALRPTIFISVP 351          
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Match: A0A0L0T6Z6_ALLM3 (Long-chain-fatty-acid--CoA ligase n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T6Z6_ALLM3)

HSP 1 Score: 72.4 bits (176), Expect = 5.610e-11
Identity = 74/260 (28.46%), Postives = 120/260 (46.15%), Query Frame = 0
Query:    3 RATVLGSGLRRL---------------TAAVPGTHVGLLAGNSVEWVEAELACRCFSLVTVILHAP-SPALLDAVLDAADVEVLICDRVWVPAILRHRRKRPSARLRAIVQTSSL------YFEEMVQSHQAGVYLHAMPLVRAAGRAYPLQHIPPRPESLAHVSFAWDARLRP--SLVLHSERALVSEALRLRSHPVIRTLTQADVHLSFLPLAFAPERTFLRLASRLGMSVALLPPQDLANLATRIAQARPTVISSTP 238
            R T LGSGL R+                A +   HVGL + N  EW+ AE AC C+SLV+V L+    P  L+ +++ A+V+V++     +  +++ R K P   L+ IV    L      Y +  + + +  + + ++  V   GR  PL+H PP PE L  + +       P  +++ H   A  +    L  H ++    + D HLS+LPL+   ER  + +A   G  +A     D+  L   I  ++PT   S P
Sbjct:  102 RMTNLGSGLLRVYDEYVVQPARAKGEPVARLDKWHVGLYSINRPEWLLAEGACNCYSLVSVPLYDTLGPDALEYIVNHAEVQVVVASADRLINLVQVRDKCPG--LKVIVSMDPLDSAAAGYLK--LWAAEKDLVIISINEVEDLGRTAPLKHHPPTPEDLCTICYTSGTTGNPKGAMLTHGNMAATN---MLGYHGLV--YGRDDTHLSYLPLSHIFERAVVAMAMAGGSKIAFYRG-DVTLLVEDIVASQPTAFISVP 351          
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Match: UPI001CF3CDD1 (long-chain-fatty-acid--CoA ligase 1-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3CDD1)

HSP 1 Score: 63.9 bits (154), Expect = 4.110e-8
Identity = 59/222 (26.58%), Postives = 98/222 (44.14%), Query Frame = 0
Query:   21 THVGLLAGNSVEWVEAELACRCFSLVTVILHAP-SPALLDAVLDAADVEVLICDRVWVPAILRHRRKRPSARLRAIVQTSS-LYFEEMVQSHQAGVYLHAMPLVRAAGRAYPLQHIPPRPESLAHVSFAWDARLRPSLVLHSERALVSE--ALRLRSHPVIRTLTQADVHLSFLPLAFAPERTFLRLASRLGMSVALLPPQDLANLATRIAQARPTVISSTP 238
            T VG+ A N +EWV  E AC  +SL  V L+    P     +++ A +  + CD   +   L    K P+  L+ +V+  + +  EE     ++GV + A   +   G+ +  +  PP+P+ +A V +       P  V+ + + + +   +L         T   ADVHLS+LPLA   ER    +    G  V         N+   + + +PTV  S P
Sbjct:  139 TFVGVYAPNKIEWVLVEQACNLYSLSIVPLYDTLGPDACVYIINQARMTTVACDEGKLKTFLEQCTKCPT--LKNVVKIGAKVTDEEKAAGDESGVNVIAFAELEELGKNHRHEKKPPKPDDIAVVCYTSGTTGNPKGVMSTHKNITATLGSLVFIVEKCGITYDDADVHLSYLPLAHMYERLAQLMMFLYGAKVGFFGGNP-RNILDDLKELKPTVFISVP 357          
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Match: A0A833X778_JUGRE (Long-chain-fatty-acid--CoA ligase n=11 Tax=Juglandaceae TaxID=16714 RepID=A0A833X778_JUGRE)

HSP 1 Score: 63.2 bits (152), Expect = 7.500e-8
Identity = 63/235 (26.81%), Postives = 101/235 (42.98%), Query Frame = 0
Query:    7 LGSGLRRLTAAVPGTHVGLLAGNSVEWVEAELACRCFSLVTVILHAP-SPALLDAVLDAADVEVLICDRVWVPAILRHRRKRPSARLRAIVQTSSLYFEEMVQSHQAGVYLHAMPLVRAAGRAYPLQHIPPRPESLAHVSFAWDARLRPSLVL--HSERALVSEALRLRSHPVIRTLTQADVHLSFLPLAFAPERTFLRLASRLGMSVALLPPQDLANLATRIAQARPTVISSTP 238
            +GS LR  + A PG+ VG+   N  +WV A  AC    L+ V L+    P  ++ +LD A+V+ +      V  +L       + RL+ +V  +S+  EE   +   G+  ++       G+  P   IPP+   +  + +       P  V   H   A     + L        +T+ADV+LSFLPLA   +R       R G SV      DL  +   + + +PT  +  P
Sbjct:  124 IGSALRA-SGAEPGSRVGIYGSNCPQWVTAMEACNAHRLICVPLYDTLGPGAVNFILDHAEVDFVFVQDKKVKELLNPDCSH-AQRLKTLVCFTSMEEEEEKTAAGIGIKPYSWNEFLRMGKENPSDIIPPQAFHICTIMYTSGTSGDPKGVALTHENIAYFIRGMDLFMEQFEDKMTEADVYLSFLPLAHIIDRVIEEYFFRKGASVGYYHG-DLKAIRDDLMELKPTCFAGVP 355          
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Match: UPI000D73940E (LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase 5-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D73940E)

HSP 1 Score: 62.8 bits (151), Expect = 1.020e-7
Identity = 67/260 (25.77%), Postives = 116/260 (44.62%), Query Frame = 0
Query:    8 GSGLRRLTAAV-PG--THVGLLAGNSVEWVEAELACRCFSLVTVILHAP-SPALLDAVLDAADVEVLICDRVW-VPAILRHRRKRPSARLRAIVQTSSLYFEEMVQSHQAGVYLHA------MPLVRAAGRA-----YPLQHI-----------PPRPESLAHVSFAWDARLRPSLVL--HSERALVSEALRLRSHPVIRTLTQADVHLSFLPLAFAPERTFLRLASRLGMSVALLPPQDLANLATRIAQARPTVISSTP 238
            GSGL  + A V PG  + VG+ + N +EW  A+L C+ FS+V V L+    P     +++  ++  +ICD    V  +L    K PS +   ++   S   +++   H   ++  A        ++ + GR+       + HI           PP P+ LA + +       P  V+  H+   +   A+  ++  +  +LT ADVHLS+LPLA   ER    +    G+ +      D+  L   + + +PTV  + P
Sbjct:  127 GSGL--INAGVNPGNSSFVGIYSSNRIEWAVADLGCQTFSIVPVPLYDTLGPEACRFIINQTNLSTVICDNTSKVKKLLEEVSKTPSLKRIVVMDPHSDDLKKLASDHDVKLFTSARLSAQEFLILSSKGRSDTANIVQIFHITLGKENLQDPLPPAPDDLATLCYTSGTTGDPKGVMLTHANIVINLSAVYFQAMGIF-SLTSADVHLSYLPLAHMFERGMHSMMFMHGVKIGYFQG-DIRKLTEDLMELKPTVFITVP 382          
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Match: A0A7S0ZUL9_NOCSC (Hypothetical protein (Fragment) n=4 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZUL9_NOCSC)

HSP 1 Score: 56.6 bits (135), Expect = 1.190e-5
Identity = 69/249 (27.71%), Postives = 112/249 (44.98%), Query Frame = 0
Query:    3 RATVLGSGLRRLTAAVPGTHVGLLAGNSVEWVEAELACRCFSLVTVILHAP-SPALLDAVLDAADVEVLIC-DRVW--VPAILRHR--RKRPSARLRAIVQTSSLYF---EEMVQSHQAGVYLHAMPLVRAAGRAYPLQ---HIPPRPESLAHVSFAWDARLRPSLVLHSERALVSEALRLRSHPVIRTLTQADVHLSFLPLAFAPER-TFLRLASRLGMSVALLPPQDLANLATRIAQARPTVISSTP 238
            +A  LG+ LRR         + + A NSV+WV ++LAC  ++  +V ++    P     ++  +  +VL C D+ +  VPA L+     K P A L+ +V     YF   ++  ++    + L  + L  A  + Y        PP    +A + +       P  V+     +V+    +  HP I TLT  DVHLS+LPLA   ER   L L S+ G +V     Q    L   ++  +PT+ +  P
Sbjct:  197 QARALGTCLRRDFGIGQKEKMAIWASNSVDWVLSDLACAAYNFTSVSVYDTLGPDAASYIVADSGAQVLCCEDKCFKRVPAALKDEIYSKNPGADLKVVV-----YFGKGDDATKATLEAMGLKVISLAEALAK-YKTDVDADTPPEASDVATIMYTSGTTGMPKGVMLQHLNIVATVSLMVLHPSI-TLTNEDVHLSYLPLAHIFERQNVLALLSK-GATV-YFASQGAKFLLPDLSVVKPTLFAGVP 436          
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Match: A0A271IUC5_9BACT (Long-chain fatty acid--CoA ligase n=2 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A271IUC5_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 1.540e-5
Identity = 61/223 (27.35%), Postives = 97/223 (43.50%), Query Frame = 0
Query:   20 GTHVGLLAGNSVEWVEAELACRCFSLVTVILHAPSPALLDA--VLDAADVEVLICDRVWVPAILRHRRKRPSARLRAIVQTSSLYFEEMVQSHQAGVYLHAMPLVRAAGRAYPLQHIPPRPESLAHVSFAWDARLRPSLVLHSERALVSEALRLRSHPVIRTL--TQADVHLSFLPLAFAPERTFLRLASRLGMSVALLPPQDLANLATRIAQARPTVISSTP 238
            G  V +L+ N  EW  A+LA +    VTV L+  +PA   A  V D+  V +++   + +    R     P   LRAIV  +    E         V   A  L   A  A  L      P+ L+ + +       P  V+ + R L+S       H  +  +  T+ DVHLSFLPL+ A ERT    ++ L     ++  + +  ++  + + RPT++ S P
Sbjct:   66 GDRVAILSENRPEWAVADLATQVLGAVTVALYTTTPASQVAYVVRDSGAVVLIVSTGLQLRKADRAYDDCPD--LRAIVSMA----EPRKARPDTPVTTWADALAEGARHAVTLDEAVVTPDDLSALIYTSGTTGEPKGVMMTHRNLMSNV-----HAALERIDVTEDDVHLSFLPLSHAFERT-AGYSTVLAAGAQIVYAESIDAISKNLPEVRPTLMVSVP 276          
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Match: A0A2H2I4J4_CAEJA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2I4J4_CAEJA)

HSP 1 Score: 55.8 bits (133), Expect = 2.140e-5
Identity = 51/181 (28.18%), Postives = 85/181 (46.96%), Query Frame = 0
Query:   21 THVGLLAGNSVEWVEAELACRCFSLVTVILHAP-SPALLDAVLDAADVEVLICD-RVWVPAILRHRRKRPSARLRAIVQTSSLYFEEMVQSHQAGVYLHAMP-LVRAAGRAYPLQHIPPRPESLAHVSFAWDARLRPSLVLHSERALVSEALRLRSHPVIRTLTQADVHLSFLPLAFAPER 198
            +++G+ + N  EWV A++    FS VTV L+   S   L  +    ++ ++  D       ++R +   P+  L+ IVQ   +  E +  + +    L +    V    +   L H+PP+PE+LA +SF      RP  V+ S   L+S  L   S    ++    D +LS+LPLA   ER
Sbjct:  141 SNIGIYSKNRSEWVLADMGLHNFSNVTVPLYDTISNDDLHYITSLCELPLMFVDMEEKTKLLIRDKSYLPT--LKYIVQFDKVSQEALQLARENDFQLFSFDEFVEMGKKEKHLPHVPPKPETLATISFTSGTTGRPKGVMLSHMNLISATLS--SDEFEKSTNGGDAYLSYLPLAHIYER 317          
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Match: A0A2G5BGX6_COERN (Acetyl-CoA synthetase-like protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BGX6_COERN)

HSP 1 Score: 55.1 bits (131), Expect = 3.830e-5
Identity = 56/239 (23.43%), Postives = 105/239 (43.93%), Query Frame = 0
Query:    7 LGSGLRRLTAAVPGTHVGLLAGNSVEWVEAELAC--RCFSLVTVILHAPSPALLDAVLDAADVEVLICDRVWVPAILRHRRKRPSARLRAIVQTSSLYFEEM-VQSHQAGVYLHAMPLVRAAGRAYPLQHIP-PRPESLAHVSFA--WDARLRPSLVLHSE-RALVSEALRLRSHPVIRTLTQADVHLSFLPLAFAPERTFLRLASRLGMSVALLPPQDLANLATRIAQARPTVISSTP 238
            L SG R +    PG  VG++ GNS+EW+  E A   +CF LV +       +L + ++    ++ ++CD+  V  +  H     S  L++++ T +   E M + ++ + +++ +   +   G   P++    P  + +A + +      R +  ++ H+   A ++  L LR    +   +  D  + FLPLA    R    L    G   A  P  D A L   +   +PT+    P
Sbjct:   96 LASGFRHI-GLQPGDRVGVMLGNSIEWMLTEYAAYYQCFVLVPLYETLGLDSL-EQIIQETGMQTIVCDKKHVGIL--HEISETSPSLQSLIVTGTSQSELMQISNNSSTMHVQSFDSIEELGARQPIETKKLPVADDVATIVYTSGTSGRQKGVVIRHANFLASIAAVLALRDAGDMYNFSTKDCSMGFLPLAHCLGRLVTHLVIASGGRTAF-PRGDPAKLVEDLKDLQPTIFVGVP 329          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89829.20826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A5A8CPR4_CAFRO1.080e-4438.62AMP-binding domain-containing protein n=8 Tax=Cafe... [more]
UPI00106BDC752.000e-1228.57long-chain-fatty-acid--CoA ligase 1-like n=1 Tax=D... [more]
A0A0L0T6Z6_ALLM35.610e-1128.46Long-chain-fatty-acid--CoA ligase n=2 Tax=Allomyce... [more]
UPI001CF3CDD14.110e-826.58long-chain-fatty-acid--CoA ligase 1-like n=1 Tax=A... [more]
A0A833X778_JUGRE7.500e-826.81Long-chain-fatty-acid--CoA ligase n=11 Tax=Jugland... [more]
UPI000D73940E1.020e-725.77LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA li... [more]
A0A7S0ZUL9_NOCSC1.190e-527.71Hypothetical protein (Fragment) n=4 Tax=Noctiluca ... [more]
A0A271IUC5_9BACT1.540e-527.35Long-chain fatty acid--CoA ligase n=2 Tax=Bacteroi... [more]
A0A2H2I4J4_CAEJA2.140e-528.18Long-chain-fatty-acid--CoA ligase n=1 Tax=Caenorha... [more]
A0A2G5BGX6_COERN3.830e-523.43Acetyl-CoA synthetase-like protein n=1 Tax=Coemans... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 2..238
e-value: 6.9E-18
score: 64.4
IPR042099AMP-dependent synthetase-like superfamilyGENE3D3.40.50.12780coord: 1..238
e-value: 2.5E-15
score: 58.0
NoneNo IPR availablePANTHERPTHR43272FAMILY NOT NAMEDcoord: 2..203
NoneNo IPR availablePANTHERPTHR43272:SF54LONG-CHAIN-FATTY-ACID--COA LIGASE 6coord: 2..203
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 2..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89829contigM-pyrifera_M_contig89829:50..763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89829.20826.1mRNA_M-pyrifera_M_contig89829.20826.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89829 23..763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89829.20826.1 ID=prot_M-pyrifera_M_contig89829.20826.1|Name=mRNA_M-pyrifera_M_contig89829.20826.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
MARATVLGSGLRRLTAAVPGTHVGLLAGNSVEWVEAELACRCFSLVTVIL
HAPSPALLDAVLDAADVEVLICDRVWVPAILRHRRKRPSARLRAIVQTSS
LYFEEMVQSHQAGVYLHAMPLVRAAGRAYPLQHIPPRPESLAHVSFAWDA
RLRPSLVLHSERALVSEALRLRSHPVIRTLTQADVHLSFLPLAFAPERTF
LRLASRLGMSVALLPPQDLANLATRIAQARPTVISSTP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
IPR042099AMP-dep_Synthh-like_sf