prot_M-pyrifera_M_contig89819.20822.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig89819.20822.1
Unique Name	prot_M-pyrifera_M_contig89819.20822.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	217

Homology

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BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A6G0I0H0_LARCR (Helicase C-terminal domain-containing protein n=5 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6G0I0H0_LARCR)

HSP 1 Score: 243 bits (621), Expect = 1.070e-73
Identity = 122/217 (56.22%), Postives = 168/217 (77.42%), Query Frame = 0

Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V++++ DVD+GWGVV+
Sbjct:   50 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKYEEQYHAI--EIPNEESVVTYFKIRQQLAKLGKEIQEFVHKPKYCLPFLQPGRLVKVKNDDVDFGWGVVV 262

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BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: UPI00105540D7 (exosome RNA helicase MTR4 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=UPI00105540D7)

HSP 1 Score: 241 bits (615), Expect = 5.090e-72
Identity = 121/217 (55.76%), Postives = 167/217 (76.96%), Query Frame = 0

Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+  ++V++  + ++  ++   + +  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  460 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHAI--EIPNEESVVAYFKIRQQLAKLGKEILEFIHKPKYCLPFLQPGRLVKVKNEDADFGWGVVV 672

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BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3P8WWQ2_CYNSE (Mtr4 exosome RNA helicase n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WWQ2_CYNSE)

HSP 1 Score: 245 bits (626), Expect = 5.930e-72
Identity = 121/217 (55.76%), Postives = 169/217 (77.88%), Query Frame = 0

Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  ++  +IP+  +++++  + ++  ++   +++  N P  CL FL+PGR+V++R+QD+D+GWG+V+
Sbjct:  453 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHSI--EIPNEESVITYFKIRQQLAKLAKDIQEFINKPKYCLPFLQPGRLVKVRNQDLDFGWGIVV 665

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BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A087XC50_POEFO (Mtr4 exosome RNA helicase n=2 Tax=Poecilia formosa TaxID=48698 RepID=A0A087XC50_POEFO)

HSP 1 Score: 239 bits (611), Expect = 5.240e-71
Identity = 119/217 (54.84%), Postives = 167/217 (76.96%), Query Frame = 0

Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  +Q   +  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  209 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEDQYHTI--EIPNEESVVTYFKIRQQLAKLGKEIQEFIHKPKYCLPFLQPGRLVKVKNEDTDFGWGVVV 421

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BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3Q0SCM6_AMPCI (Mtr4 exosome RNA helicase n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0SCM6_AMPCI)

HSP 1 Score: 242 bits (617), Expect = 8.080e-71
Identity = 121/217 (55.76%), Postives = 167/217 (76.96%), Query Frame = 0

Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ   +  +IP+   +V++  + ++  ++   +++  + P  CL FL+PGR+V+++++DVD+GWGVV+
Sbjct:  418 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHTI--EIPNEENVVTYFKIRQQLAKLGKDIQEFIHKPKYCLPFLQPGRLVKVKNEDVDFGWGVVV 630

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BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3Q3MWB7_9LABR (Mtr4 exosome RNA helicase n=23 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q3MWB7_9LABR)

HSP 1 Score: 242 bits (618), Expect = 8.210e-71
Identity = 121/217 (55.76%), Postives = 168/217 (77.42%), Query Frame = 0

Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG +HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+   +V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  459 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKSHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKYEEQYHAI--EIPNEEGVVTYFKIRQQLAKLGKEIQEFTHKPKYCLPFLQPGRLVKVKNEDADFGWGVVV 671

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BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A667YWA3_9TELE (Mtr4 exosome RNA helicase n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YWA3_9TELE)

HSP 1 Score: 242 bits (617), Expect = 8.930e-71
Identity = 122/217 (56.22%), Postives = 167/217 (76.96%), Query Frame = 0

Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+D RGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+  ++VS+  + ++  R+   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  430 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDKRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHAI--EIPNEESVVSYYKIRQQLARLGKEIQEFIHKPKYCLPFLQPGRLVKVKNEDADFGWGVVV 642

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BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3Q3CKI2_HAPBU (Mtr4 exosome RNA helicase n=4 Tax=Haplochromini TaxID=319058 RepID=A0A3Q3CKI2_HAPBU)

HSP 1 Score: 241 bits (616), Expect = 1.200e-70
Identity = 120/217 (55.30%), Postives = 167/217 (76.96%), Query Frame = 0

Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ   +  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  434 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHTI--EIPNEESVVTYFKIRQQLAKLSKEIQEFIHKPKYCLPFLQPGRLVKVKNEDADFGWGVVM 646

[Close]

BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3B5A4B2_9TELE (Mtr4 exosome RNA helicase n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B5A4B2_9TELE)

HSP 1 Score: 241 bits (616), Expect = 1.230e-70
Identity = 120/217 (55.30%), Postives = 169/217 (77.88%), Query Frame = 0

Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG +HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ V +  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V++++++ D+GWGVV+
Sbjct:  429 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKSHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYVNI--EIPNEESVVTYFKIRQQLAKLGKEIQEFIHKPKYCLPFLQPGRLVKVKNEEADFGWGVVV 641

[Close]

BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A673C7S6_9TELE (Mtr4 exosome RNA helicase n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673C7S6_9TELE)

HSP 1 Score: 241 bits (615), Expect = 1.370e-70
Identity = 121/217 (55.76%), Postives = 167/217 (76.96%), Query Frame = 0

Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ   +  DIP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  402 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHKI--DIPNEESVVTYFKIRQQLAKLGKDIQEFIHKPKHCLPFLQPGRLVKVKNEDADFGWGVVV 614

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6G0I0H0_LARCR	1.070e-73	56.22	Helicase C-terminal domain-containing protein n=5 ...	[more]
UPI00105540D7	5.090e-72	55.76	exosome RNA helicase MTR4 n=1 Tax=Gouania willdeno...	[more]
A0A3P8WWQ2_CYNSE	5.930e-72	55.76	Mtr4 exosome RNA helicase n=1 Tax=Cynoglossus semi...	[more]
A0A087XC50_POEFO	5.240e-71	54.84	Mtr4 exosome RNA helicase n=2 Tax=Poecilia formosa...	[more]
A0A3Q0SCM6_AMPCI	8.080e-71	55.76	Mtr4 exosome RNA helicase n=1 Tax=Amphilophus citr...	[more]
A0A3Q3MWB7_9LABR	8.210e-71	55.76	Mtr4 exosome RNA helicase n=23 Tax=Percomorphaceae...	[more]
A0A667YWA3_9TELE	8.930e-71	56.22	Mtr4 exosome RNA helicase n=2 Tax=Myripristis murd...	[more]
A0A3Q3CKI2_HAPBU	1.200e-70	55.30	Mtr4 exosome RNA helicase n=4 Tax=Haplochromini Ta...	[more]
A0A3B5A4B2_9TELE	1.230e-70	55.30	Mtr4 exosome RNA helicase n=1 Tax=Stegastes partit...	[more]
A0A673C7S6_9TELE	1.370e-70	55.76	Mtr4 exosome RNA helicase n=1 Tax=Sphaeramia orbic...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..98 e-value: 7.8E-40 score: 138.7
None	No IPR available	GENE3D	1.20.1500.20		coord: 129..212 e-value: 3.2E-5 score: 25.8
None	No IPR available	PANTHER	PTHR12131:SF7	EXOSOME RNA HELICASE MTR4	coord: 1..216
None	No IPR available	PANTHER	PTHR12131	ATP-DEPENDENT RNA AND DNA HELICASE	coord: 1..216
IPR025696	rRNA-processing arch domain	PFAM	PF13234	rRNA_proc-arch	coord: 122..217 e-value: 5.7E-23 score: 82.2
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 11..66 e-value: 2.1E-5 score: 24.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 1..115 score: 9.911
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..81

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig89819	contig	M-pyrifera_M_contig89819:2..652 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig89819.20822.1	mRNA_M-pyrifera_M_contig89819.20822.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig89819 2..652 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig89819.20822.1 ID=prot_M-pyrifera_M_contig89819.20822.1|Name=mRNA_M-pyrifera_M_contig89819.20822.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTL
SAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSA
FHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTE
QLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGR
IVRIRDQDVDWGWGVVL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025696	rRNA_proc-arch_dom
IPR001650	Helicase_C
IPR027417	P-loop_NTPase