prot_M-pyrifera_M_contig89776.20809.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89776.20809.1
Unique Nameprot_M-pyrifera_M_contig89776.20809.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length229
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig89776.20809.1 vs. uniprot
Match: X1PXW8_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1PXW8_9ZZZZ)

HSP 1 Score: 99.0 bits (245), Expect = 1.890e-21
Identity = 54/140 (38.57%), Postives = 79/140 (56.43%), Query Frame = 0 
Query:    1 SSEQGIKVLLGEATTIRRLQRSLASFLDRCRQASPEKFLKQVSLLLEKRATQKGLASDILPDGVTIENFKAFLDAANGVADLAANDGDPCPFCRRPLDGDALELVRRYHDFLISTLQTEIKKLAQDVEDSSTKLEGVRDF 140
            SSEQG+K+L  E TT+   + ++  F +   + +P    + ++ L EK+  QK LA +ILP  V    FK FL AA    D   + GDPCPFCR  ++   + LV++YH FL + LQ EI  +   + +S   L+GV DF
Sbjct:  119 SSEQGLKLLRSEVTTLNAWKNAITEFCELAGKVAPSVPKQLLAKLTEKKQIQKELAKEILPGNVEFGEFKTFLAAAQPFFDYEPSLGDPCPFCRTSMELPVINLVKKYHKFLTNRLQDEIITIESGINESLKTLQGVIDF 258
[Close]
BLAST of mRNA_M-pyrifera_M_contig89776.20809.1 vs. uniprot
Match: A0A2E5JHP3_9PROT (AAA_13 domain-containing protein n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2E5JHP3_9PROT)

HSP 1 Score: 64.7 bits (156), Expect = 2.010e-8
Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 0 
Query:   45 LLEKRATQKGLASDILPDGVTIENFKAFLDAANGVADLAANDGDPCPFCRRPLDGDALELVRRYHDFLISTLQTEI 120
            LL+ R  QKG    ++PD V +  FK FL  +  V D    +   C FC+RPL+GD+LE++++Y+ FL S L+ +I
Sbjct:  342 LLKLREEQKGDIQFLVPDKVNLGKFKEFLKQSKDVLDYENTEFKECLFCKRPLEGDSLEIIQKYYKFLKSDLEHKI 417
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89776.20809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
X1PXW8_9ZZZZ1.890e-2138.57Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A2E5JHP3_9PROT2.010e-840.79AAA_13 domain-containing protein n=1 Tax=Halobacte... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..133
NoneNo IPR availableSUPERFAMILY75712Rad50 coiled-coil Zn hookcoord: 68..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89776contigM-pyrifera_M_contig89776:115..801 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89776.20809.1mRNA_M-pyrifera_M_contig89776.20809.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89776 115..801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89776.20809.1 ID=prot_M-pyrifera_M_contig89776.20809.1|Name=mRNA_M-pyrifera_M_contig89776.20809.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
SSEQGIKVLLGEATTIRRLQRSLASFLDRCRQASPEKFLKQVSLLLEKRA
TQKGLASDILPDGVTIENFKAFLDAANGVADLAANDGDPCPFCRRPLDGD
ALELVRRYHDFLISTLQTEIKKLAQDVEDSSTKLEGVRDFKIDIDDDTSS
FLTADERQSLLNAIDGVKKSIPNPLSRNEEHSIGSFGSLEAIEEIEKRLV
TEADKRDEAIQSAKSGSAERQKEIDRLTA
back to top