prot_M-pyrifera_M_contig89708.20798.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89708.20798.1
Unique Nameprot_M-pyrifera_M_contig89708.20798.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Match: A0A5J6SDD9_POTMO (Galactosylceramidase 2 isoform 2 n=1 Tax=Potamotrygon motoro TaxID=86373 RepID=A0A5J6SDD9_POTMO)

HSP 1 Score: 102 bits (253), Expect = 1.500e-25
Identity = 52/84 (61.90%), Postives = 59/84 (70.24%), Query Frame = 0 
Query:   30 LGPRFDGIGALSGGGATSRLLQDYEN--NTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDLSYSRGYEWELM 111
            LGP FDGIG LSGGGATSRLL +Y+    +   D LFKP +GASLH+LK EIG    T  GTEPSH +  DD +Y RGYEW LM
Sbjct:   38 LGPEFDGIGGLSGGGATSRLLVNYQEPYRSQILDYLFKPNFGASLHILKVEIGGDAQTTDGTEPSHMHYEDDANYFRGYEWWLM 121
[Close]
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Match: A0A7S2NCB8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2NCB8_9DINO)

HSP 1 Score: 97.4 bits (241), Expect = 5.060e-24
Identity = 51/91 (56.04%), Postives = 59/91 (64.84%), Query Frame = 0 
Query:   23 LPISGLRLGPRFDGIGALSGGGATSRLLQDYEN--NTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDLSYSRGYEWELM 111
            L I   R+G  FDGIG LSGGGATSRLL DY     +   D +FKP YGASLH+LK EIG  + +  G E SH +  DDL Y RGYEW L+
Sbjct:   19 LTIDTRRVGQTFDGIGGLSGGGATSRLLVDYPEPQRSQILDYMFKPNYGASLHILKVEIGGDSQSTDGVESSHMHSADDLDYHRGYEWWLL 109
[Close]
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Match: A0A1A8GPQ5_9TELE (Galactosylceramidase (Fragment) n=1 Tax=Nothobranchius korthausae TaxID=1143690 RepID=A0A1A8GPQ5_9TELE)

HSP 1 Score: 96.3 bits (238), Expect = 2.950e-23
Identity = 51/84 (60.71%), Postives = 58/84 (69.05%), Query Frame = 0 
Query:   30 LGPRFDGIGALSGGGATSRLLQDYEN--NTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDLSYSRGYEWELM 111
            LG  FDGIG LSGGGATSRLL +YE    +   D LFKP +GASLH+LK EIG    T  GTEPSH +  +D +Y RGYEW LM
Sbjct:   35 LGRVFDGIGGLSGGGATSRLLVNYEEPYRSQILDFLFKPNFGASLHILKVEIGGDAQTTDGTEPSHMHYENDENYFRGYEWWLM 118
[Close]
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Match: A0A672T3L5_SINGR (Galactocerebrosidase n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672T3L5_SINGR)

HSP 1 Score: 97.4 bits (241), Expect = 5.860e-23
Identity = 50/84 (59.52%), Postives = 58/84 (69.05%), Query Frame = 0 
Query:   30 LGPRFDGIGALSGGGATSRLLQDYEN--NTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDLSYSRGYEWELM 111
            LG  FDGIG LSGGGATSRLL +YE    +   D LFKP +GASLH+LK EIG    T  GTEPSH +  D+ ++ RGYEW LM
Sbjct:   49 LGREFDGIGGLSGGGATSRLLVNYEEPYRSQILDFLFKPNFGASLHILKVEIGGDAQTTDGTEPSHMHSKDEANFFRGYEWWLM 132
[Close]
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Match: A0A5J6SDX6_POTMO (Galactocerebrosidase n=2 Tax=Potamotrygon motoro TaxID=86373 RepID=A0A5J6SDX6_POTMO)

HSP 1 Score: 102 bits (253), Expect = 6.190e-23
Identity = 52/84 (61.90%), Postives = 59/84 (70.24%), Query Frame = 0 
Query:   30 LGPRFDGIGALSGGGATSRLLQDYEN--NTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDLSYSRGYEWELM 111
            LGP FDGIG LSGGGATSRLL +Y+    +   D LFKP +GASLH+LK EIG    T  GTEPSH +  DD +Y RGYEW LM
Sbjct:   38 LGPEFDGIGGLSGGGATSRLLVNYQEPYRSQILDYLFKPNFGASLHILKVEIGGDAQTTDGTEPSHMHYEDDANYFRGYEWWLM 121
[Close]
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Match: UPI001BB25076 (galactocerebrosidase-like isoform X2 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB25076)

HSP 1 Score: 101 bits (252), Expect = 8.430e-23
Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 0 
Query:    6 FTVLSLSVAVGAIPTG---MLPISGLRLGPRFDGIGALSGGGATSRLLQDYEN--NTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDLSYSRGYEWELM 111
            F +LSL++    + +G   ++  SG  LGPRFDGIG LSGGGATSRLL  Y +   +   D LF P +GASLH+LK EIG    +  GTEPSH +  DD +Y RGYEW LM
Sbjct:    6 FAILSLTIVFACLASGASYLVDDSG-GLGPRFDGIGGLSGGGATSRLLVSYPDPERSQILDYLFSPNFGASLHMLKVEIGGDAQSTEGTEPSHMHSPDDENYQRGYEWWLM 115
[Close]
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Match: UPI00140256E2 (galactocerebrosidase isoform X2 n=2 Tax=Amblyraja radiata TaxID=386614 RepID=UPI00140256E2)

HSP 1 Score: 101 bits (251), Expect = 1.150e-22
Identity = 52/84 (61.90%), Postives = 59/84 (70.24%), Query Frame = 0 
Query:   30 LGPRFDGIGALSGGGATSRLLQDYEN--NTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDLSYSRGYEWELM 111
            LGP FDGIG LSGGGATSRLL +Y+    +   D LFKP +GASLH+LK EIG    T  GTEPSH +  DD +Y RGYEW LM
Sbjct:   28 LGPEFDGIGGLSGGGATSRLLVNYQEPYRSQILDYLFKPNFGASLHILKVEIGGDAQTTDGTEPSHMHYEDDENYFRGYEWWLM 111
[Close]
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Match: UPI001CB866F6 (galactocerebrosidase isoform X1 n=4 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB866F6)

HSP 1 Score: 101 bits (251), Expect = 1.160e-22
Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 0 
Query:   30 LGPRFDGIGALSGGGATSRLLQDYEN--NTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDLSYSRGYEWELM 111
            LGP+FDGIG LSGGGATSRLL +Y     +   D LFKP +GASLH+LK EIG    T  GTEPSH +  +D +YSRGYEW LM
Sbjct:   49 LGPQFDGIGGLSGGGATSRLLVNYPEPYRSQILDYLFKPNFGASLHILKVEIGGDAQTTDGTEPSHMHDENDENYSRGYEWWLM 132
[Close]
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Match: A0A8C4KDJ0_DRONO (Galactocerebrosidase n=1 Tax=Dromaius novaehollandiae TaxID=8790 RepID=A0A8C4KDJ0_DRONO)

HSP 1 Score: 96.7 bits (239), Expect = 1.890e-22
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 0 
Query:   30 LGPRFDGIGALSGGGATSRLLQDYEN--NTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDLSYSRGYEWELM 111
            LG RFDGIGA+SGGGATSRLL +Y+    +   D LFKP +GA+LH+LK EIG    +  GTEPSH +  DD +Y RGYEW LM
Sbjct:   49 LGRRFDGIGAVSGGGATSRLLVNYQEPYRSQILDYLFKPNFGAALHILKVEIGGDGQSTDGTEPSHMHYEDDENYFRGYEWWLM 132
[Close]
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Match: A0A7M7NW26_STRPU (Galactosylceramidase n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NW26_STRPU)

HSP 1 Score: 100 bits (249), Expect = 2.150e-22
Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 0 
Query:   30 LGPRFDGIGALSGGGATSRLLQDYEN--NTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDLSYSRGYEWELM 111
            LGPRFDGIG +SGGGATSRLL  Y +   +   D LF P +GA+LH+LK E+G    +G GTEPSH +  DD +Y RGYEW LM
Sbjct:   42 LGPRFDGIGGISGGGATSRLLVSYPDPERSQILDYLFSPNFGAALHILKVEMGGDAESGIGTEPSHMHSPDDENYQRGYEWWLM 125
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89708.20798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J6SDD9_POTMO1.500e-2561.90Galactosylceramidase 2 isoform 2 n=1 Tax=Potamotry... [more]
A0A7S2NCB8_9DINO5.060e-2456.04Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A1A8GPQ5_9TELE2.950e-2360.71Galactosylceramidase (Fragment) n=1 Tax=Nothobranc... [more]
A0A672T3L5_SINGR5.860e-2359.52Galactocerebrosidase n=1 Tax=Sinocyclocheilus grah... [more]
A0A5J6SDX6_POTMO6.190e-2361.90Galactocerebrosidase n=2 Tax=Potamotrygon motoro T... [more]
UPI001BB250768.430e-2352.25galactocerebrosidase-like isoform X2 n=2 Tax=Lytec... [more]
UPI00140256E21.150e-2261.90galactocerebrosidase isoform X2 n=2 Tax=Amblyraja ... [more]
UPI001CB866F61.160e-2261.90galactocerebrosidase isoform X1 n=4 Tax=Chiloscyll... [more]
A0A8C4KDJ0_DRONO1.890e-2259.52Galactocerebrosidase n=1 Tax=Dromaius novaeholland... [more]
A0A7M7NW26_STRPU2.150e-2258.33Galactosylceramidase n=2 Tax=Strongylocentrotus pu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80coord: 22..92
e-value: 4.4E-13
score: 50.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.731
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR001286Glycoside hydrolase, family 59PFAMPF02057Glyco_hydro_59coord: 34..111
e-value: 1.3E-22
score: 80.5
IPR001286Glycoside hydrolase, family 59PANTHERPTHR15172GALACTOCEREBROSIDASEcoord: 29..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89708contigM-pyrifera_M_contig89708:176..508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89708.20798.1mRNA_M-pyrifera_M_contig89708.20798.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89708 176..508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89708.20798.1 ID=prot_M-pyrifera_M_contig89708.20798.1|Name=mRNA_M-pyrifera_M_contig89708.20798.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
VLQVIFTVLSLSVAVGAIPTGMLPISGLRLGPRFDGIGALSGGGATSRLL
QDYENNTLFYDLLFKPFYGASLHLLKTEIGSATFTGCGTEPSHAYQVDDL
SYSRGYEWELM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001286Glyco_hydro_59