prot_M-pyrifera_M_contig89476.20742.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89476.20742.1
Unique Nameprot_M-pyrifera_M_contig89476.20742.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length98
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Match: A0A7S1C4Y4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4Y4_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.120e-23
Identity = 47/91 (51.65%), Postives = 63/91 (69.23%), Query Frame = 0 
Query:    8 PEPIKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEGLNMVRVWIVFKQGADRPAGKYKVERPVHYSSVQLLDPESGKPTRVGVK 98
            P P+ KWRIVRGDTV ++ G DRGK+G V  V RK+NR++VEG+NMVR  +  +       G + VE  +H S+V L+DP SGKPTRV ++
Sbjct:   23 PAPLGKWRIVRGDTVEVVSGRDRGKQGVVKRVLRKQNRIVVEGVNMVRKHV--RADGQNAGGIFSVEAALHVSNVNLVDPVSGKPTRVAIR 111
[Close]
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Match: M1D1L9_SOLTU (Ribosomal protein L24 n=12 Tax=Solanaceae TaxID=4070 RepID=M1D1L9_SOLTU)

HSP 1 Score: 94.4 bits (233), Expect = 1.740e-22
Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 0 
Query:   11 IKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEGLNMVRVWIVFKQGADRPAGKYKVERPVHYSSVQLLDPESGKPTRVGVK 98
            I +WRI+RGD V IIRG DRG+ G V  V R +NRV+VEG N+V+  I  KQG     G + VE P+H S+VQ++DP +GKPT+VG++
Sbjct:   10 IHQWRILRGDNVMIIRGKDRGETGVVKRVVRSQNRVIVEGKNLVKKHI--KQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPTKVGIR 95
[Close]
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Match: A0A2G2XXA1_CAPAN (50S ribosomal protein L24 n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2XXA1_CAPAN)

HSP 1 Score: 94.0 bits (232), Expect = 3.340e-22
Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 0 
Query:   11 IKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEGLNMVRVWIVFKQGADRPAGKYKVERPVHYSSVQLLDPESGKPTRVGVK 98
            I +WRI+RGD V IIRG D+G+ G V  V R +NRV+VEG N+V+  I  KQG     G + VE P+H S+VQL+DP +GKPT+VG++
Sbjct:   10 IHQWRILRGDNVMIIRGKDKGETGIVKRVVRSQNRVIVEGKNLVKKHI--KQGQGHEGGIFTVEAPLHVSNVQLVDPVTGKPTKVGIR 95
[Close]
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Match: A0A843X4B8_COLES (KOW domain-containing protein n=6 Tax=Mesangiospermae TaxID=1437183 RepID=A0A843X4B8_COLES)

HSP 1 Score: 93.6 bits (231), Expect = 3.490e-22
Identity = 44/88 (50.00%), Postives = 64/88 (72.73%), Query Frame = 0 
Query:   11 IKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEGLNMVRVWIVFKQGADRPAGKYKVERPVHYSSVQLLDPESGKPTRVGVK 98
            I+KW+I+RGD V IIRG D+G+ G +  V R +NRV+VEG N+V+  I  KQG     G + VE P+H S+VQ+LDP++GKP ++G++
Sbjct:   10 IEKWKILRGDNVMIIRGKDKGETGIIKRVVRSQNRVIVEGKNLVKKHI--KQGQGHEGGIFTVEAPLHVSNVQVLDPQTGKPCKIGIR 95
[Close]
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Match: A0A1S3U9F2_VIGRR (uncharacterized protein LOC106763018 n=2 Tax=indigoferoid/millettioid clade TaxID=2233855 RepID=A0A1S3U9F2_VIGRR)

HSP 1 Score: 93.2 bits (230), Expect = 4.940e-22
Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 0 
Query:   11 IKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEGLNMVRVWIVFKQGADRPAGKYKVERPVHYSSVQLLDPESGKPTRVGVK 98
            I+ W+++RGD V IIRG D+G+ G +  V R +NRV+VEG N+V+  I  KQG     G + VE P+H S+VQ+LDP +GKP +VGVK
Sbjct:   10 IRHWKVLRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLVKKHI--KQGQGHEGGIFAVEAPIHVSNVQVLDPVTGKPCKVGVK 95
[Close]
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Match: UPI00054014E3 (uncharacterized protein LOC104891324 n=3 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00054014E3)

HSP 1 Score: 93.2 bits (230), Expect = 4.940e-22
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 0 
Query:   11 IKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEGLNMVRVWIVFKQGADRPAGKYKVERPVHYSSVQLLDPESGKPTRVGVK 98
            I+ W+IVRGD V IIRG D+G+ G V  V R +NRVLVEG N+V+  I  KQG     G + VE P+H S+VQ++DP +GKP +VG++
Sbjct:   10 IRNWKIVRGDNVMIIRGKDKGETGTVKRVVRSQNRVLVEGKNLVKKHI--KQGQGHEGGIFTVEAPLHVSNVQIVDPVTGKPCKVGIR 95
[Close]
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Match: A0A0L9T591_PHAAN (KOW domain-containing protein n=2 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9T591_PHAAN)

HSP 1 Score: 92.8 bits (229), Expect = 7.000e-22
Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 0 
Query:   11 IKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEGLNMVRVWIVFKQGADRPAGKYKVERPVHYSSVQLLDPESGKPTRVGVK 98
            I+ W+++RGD V IIRG D+G+ G +  V R +NRV+VEG N+V+  I  KQG     G + VE P+H S+VQ+LDP +GKP +VGVK
Sbjct:   10 IRHWKVLRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLVKKHI--KQGQGHEGGIFAVEAPIHASNVQVLDPVTGKPCKVGVK 95
[Close]
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Match: D8M8T9_BLAHO (Ribosomal protein L24 n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M8T9_BLAHO)

HSP 1 Score: 93.2 bits (230), Expect = 8.520e-22
Identity = 50/96 (52.08%), Postives = 65/96 (67.71%), Query Frame = 0 
Query:    1 MTRKWGDPEPIKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEGLNMVRVWIVFKQGAD-RPAGKYKVERPVHYSSVQLLDPESGKPTRV 95
            + RK    + I+ W IVRGD V +I G D GK+GKVL V RK NRVLVEG+N  +  I   +G D +P G + VE P+ YS+VQL+DP +GKPT+V
Sbjct:   20 LQRKINAADTIRTWSIVRGDIVEVIHGNDMGKQGKVLRVDRKLNRVLVEGVNFRKRHI---KGTDEQPGGIFDVESPIAYSNVQLVDPSTGKPTKV 112
[Close]
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Match: A0A4D6MGL6_VIGUN (Large subunit ribosomal protein L24 n=1 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6MGL6_VIGUN)

HSP 1 Score: 93.2 bits (230), Expect = 9.370e-22
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 0 
Query:   11 IKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEGLNMVRVWIVFKQGADRPAGKYKVERPVHYSSVQLLDPESGKPTRVGVK 98
            I+ W++VRGD V IIRG D+G+ G +  V R +NRV+VEG N+V+  I  KQG     G + VE P+H S+VQ+LDP +GKP +VGVK
Sbjct:   10 IRHWKVVRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLVKKHI--KQGQGHEGGIFAVEAPLHASNVQVLDPVTGKPCKVGVK 95
[Close]
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Match: A0A1D1YGN2_9ARAE (50S ribosomal protein L24 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YGN2_9ARAE)

HSP 1 Score: 92.4 bits (228), Expect = 9.900e-22
Identity = 43/88 (48.86%), Postives = 64/88 (72.73%), Query Frame = 0 
Query:   11 IKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEGLNMVRVWIVFKQGADRPAGKYKVERPVHYSSVQLLDPESGKPTRVGVK 98
            I+KW+I+RGD V I+RG D+G+ G +  V R +NRV+VEG N+V+  I  KQG     G + VE P+H S+VQ+LDP++GKP ++G++
Sbjct:   10 IQKWKILRGDNVMIMRGKDKGETGIIKRVIRSQNRVIVEGKNLVKKHI--KQGQGHEGGIFTVEAPLHVSNVQVLDPQTGKPCKIGIR 95
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89476.20742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1C4Y4_9STRA1.120e-2351.6550S ribosomal protein L24, chloroplastic n=1 Tax=B... [more]
M1D1L9_SOLTU1.740e-2253.41Ribosomal protein L24 n=12 Tax=Solanaceae TaxID=40... [more]
A0A2G2XXA1_CAPAN3.340e-2253.4150S ribosomal protein L24 n=1 Tax=Capsicum annuum ... [more]
A0A843X4B8_COLES3.490e-2250.00KOW domain-containing protein n=6 Tax=Mesangiosper... [more]
A0A1S3U9F2_VIGRR4.940e-2251.14uncharacterized protein LOC106763018 n=2 Tax=indig... [more]
UPI00054014E34.940e-2252.27uncharacterized protein LOC104891324 n=3 Tax=Beta ... [more]
A0A0L9T591_PHAAN7.000e-2251.14KOW domain-containing protein n=2 Tax=Phaseolus an... [more]
D8M8T9_BLAHO8.520e-2252.08Ribosomal protein L24 n=1 Tax=Blastocystis hominis... [more]
A0A4D6MGL6_VIGUN9.370e-2252.27Large subunit ribosomal protein L24 n=1 Tax=Vigna ... [more]
A0A1D1YGN2_9ARAE9.900e-2248.8650S ribosomal protein L24 n=1 Tax=Anthurium amnico... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 15..42
e-value: 2.0E-6
score: 37.3
IPR005824KOWPFAMPF00467KOWcoord: 18..49
e-value: 6.1E-11
score: 41.9
IPR003256Ribosomal protein L24TIGRFAMTIGR01079TIGR01079coord: 14..98
e-value: 1.9E-22
score: 77.6
IPR003256Ribosomal protein L24PFAMPF17136ribosomal_L24coord: 66..97
e-value: 4.5E-8
score: 33.4
IPR003256Ribosomal protein L24PANTHERPTHR12903MITOCHONDRIAL RIBOSOMAL PROTEIN L24coord: 11..98
IPR003256Ribosomal protein L24HAMAPMF_01326_BRibosomal_L24_Bcoord: 14..98
score: 13.883
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 7..98
e-value: 1.9E-27
score: 97.5
IPR005825Ribosomal protein L24/L26, conserved sitePROSITEPS01108RIBOSOMAL_L24coord: 19..36
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 9..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89476contigM-pyrifera_M_contig89476:3..472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89476.20742.1mRNA_M-pyrifera_M_contig89476.20742.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89476 3..472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89476.20742.1 ID=prot_M-pyrifera_M_contig89476.20742.1|Name=mRNA_M-pyrifera_M_contig89476.20742.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp
MTRKWGDPEPIKKWRIVRGDTVRIIRGPDRGKEGKVLAVYRKKNRVLVEG
LNMVRVWIVFKQGADRPAGKYKVERPVHYSSVQLLDPESGKPTRVGVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005824KOW
IPR003256Ribosomal_L24
IPR014722Rib_L2_dom2
IPR005825Ribosomal_L24/26_CS
IPR008991Translation_prot_SH3-like_sf