prot_M-pyrifera_M_contig8940.20719.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8940.20719.1
Unique Nameprot_M-pyrifera_M_contig8940.20719.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length110
Homology
BLAST of mRNA_M-pyrifera_M_contig8940.20719.1 vs. uniprot
Match: D7FJQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ8_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 5.360e-50
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 0
Query:    7 RRWIKDMKAGQKVIGYVSDTTDFAAFVDVGVVRQGAKGKVMPVTGFLHQSEIRNPYALEGSGRAKSCEVEVKKGIHLTAYVKDVFPNAGRLTLSLDPEMNKDKV 110
            RRWIK++K G KVIGYV+DTT+FAAFVD  VVRQG+K K++PVTGFLH ++I+ PYALEG+   K CEVEVKKGIHLTAYVKDVFPNAGR+TLSLDP +NKDKV
Sbjct:  118 RRWIKELKTGDKVIGYVADTTNFAAFVDCSVVRQGSKNKIVPVTGFLHLTDIKRPYALEGTPGVKDCEVEVKKGIHLTAYVKDVFPNAGRMTLSLDPNINKDKV 221          
BLAST of mRNA_M-pyrifera_M_contig8940.20719.1 vs. uniprot
Match: W7TQN5_9STRA (Nucleic acid-binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQN5_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.500e-15
Identity = 39/106 (36.79%), Postives = 65/106 (61.32%), Query Frame = 0
Query:   10 IKDMKAGQKVIGYVSDTTDFAAFVDVGVVRQGAKGKVMPVTGFLHQSEIRNPYALEGSGRAKSCEVE-----VKKGIHLTAYVKDVFPNAGRLTLSLDPEMNKDKV 110
            ++ ++ G ++ G V   T+FAAF+DV VVR+G  GK++     LH  ++     L      +   +E     +++GIH++ YVKDVFPN+GR +++LDP ++K KV
Sbjct:  105 LQALRPGMRLHGGVVGVTEFAAFLDVKVVREGPGGKLVRCNAMLHPHDVPEGIKLLRDSHNQPLPLETDPNVIRRGIHVSVYVKDVFPNSGRFSVTLDPSIDKAKV 210          
BLAST of mRNA_M-pyrifera_M_contig8940.20719.1 vs. uniprot
Match: K8Z3D9_NANGC (UV excision repair protein RAD23 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3D9_NANGC)

HSP 1 Score: 79.3 bits (194), Expect = 5.460e-15
Identity = 39/106 (36.79%), Postives = 65/106 (61.32%), Query Frame = 0
Query:   10 IKDMKAGQKVIGYVSDTTDFAAFVDVGVVRQGAKGKVMPVTGFLHQSEIRNPYALEGSGRAKSCEVE-----VKKGIHLTAYVKDVFPNAGRLTLSLDPEMNKDKV 110
            ++ ++ G ++ G V   T+FAAF+DV VVR+G  GK++     LH  ++     L      +   +E     +++GIH++ YVKDVFPN+GR +++LDP ++K KV
Sbjct:  105 LQALRPGMRLHGGVVGVTEFAAFLDVKVVREGPGGKLVRCNAMLHPHDVPEGIKLLRDSHNQPLPLETDPNVIRRGIHVSVYVKDVFPNSGRFSVTLDPSIDKAKV 210          
BLAST of mRNA_M-pyrifera_M_contig8940.20719.1 vs. uniprot
Match: A0A7S2UWN5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.260e-14
Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = 0
Query:    9 WIKDMKAGQKVIGYVSDTTDFAAFVDVGVVRQGAKGKVMPVTGFLHQSEIRNPYALEGSGRAKSCEVEVKKGIHLTAYVKDVFPNAGRLTLSLDPEMNKDKV 110
            W+K +K G    G V   T+F  F++ G+VR G KG V  V G LH++++     +    R K+ +V ++KG+ +  YVK VFP +GR +L++DP + + K+
Sbjct:  140 WLKTLKTGMPFYGGVKSVTNFGVFLECGIVRPGRKGTVTRVQGMLHKTDLAPSMKVPFQYRPKATKV-LEKGMTVKCYVKAVFPQSGRFSLTMDPTITRAKL 240          
BLAST of mRNA_M-pyrifera_M_contig8940.20719.1 vs. uniprot
Match: A0A835YYC3_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC3_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.490e-13
Identity = 44/134 (32.84%), Postives = 65/134 (48.51%), Query Frame = 0
Query:   10 IKDMKAGQKVIGYVSDTTDFAAFVDVGVVR-----------------------QGAKGKVMPVTGFLHQSEIRNP-----------YALEGSGRAKSCEVEVKKGIHLTAYVKDVFPNAGRLTLSLDPEMNKDK 109
            + ++K GQ++IG V D + +AAF+D GV R                       +GA GK+ P  GFLH+S+I                        +    +KKG H++ YVKDVFPN+GR T++LDP + + K
Sbjct:   94 LSELKTGQRLIGSVVDVSPYAAFLDCGVSRSXXXXXXXXXXXXXXXXXXXXXXRGAGGKLCPCHGFLHRSDINRAAXXXXXXXXXXXXXXXXXXXDTGAAALKKGSHVSVYVKDVFPNSGRFTVTLDPAITRKK 227          
BLAST of mRNA_M-pyrifera_M_contig8940.20719.1 vs. uniprot
Match: A0A7C7QV79_9CHLR (S1 RNA-binding domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7QV79_9CHLR)

HSP 1 Score: 52.0 bits (123), Expect = 1.510e-5
Identity = 32/104 (30.77%), Postives = 53/104 (50.96%), Query Frame = 0
Query:    7 RRWIKDMKAGQKVIGYVSDTTDFAAFVDVGVVRQGAKGKVMPVTGFLHQSEIRNPYALEGSGRAKSCEVEVKKGIHLTAYVKDVFPNAGRLTLSL-DPEMNKDK 109
            ++ +K +  G KV G V++ T+F AFVD+GV R G           +H SE+R     +GSG        +  G  +T ++KD+     R++L++ +P   K K
Sbjct:   14 KKVVKTLSKGMKVTGKVTNVTEFGAFVDIGVGRDG----------LIHISELRRQGGGQGSGT-------ISTGDEVTVWIKDLDRKRNRISLTMREPARRKLK 100          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8940.20719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FJQ8_ECTSI5.360e-5075.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TQN5_9STRA2.500e-1536.79Nucleic acid-binding protein n=2 Tax=Monodopsidace... [more]
K8Z3D9_NANGC5.460e-1536.79UV excision repair protein RAD23 (Fragment) n=1 Ta... [more]
A0A7S2UWN5_9STRA1.260e-1436.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YYC3_9STRA2.490e-1332.84S1 motif domain-containing protein n=1 Tax=Tribone... [more]
A0A7C7QV79_9CHLR1.510e-530.77S1 RNA-binding domain-containing protein n=1 Tax=A... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 14..102
e-value: 6.1E-7
score: 39.1
NoneNo IPR availableGENE3D2.40.50.140coord: 6..108
e-value: 8.3E-11
score: 43.7
IPR003029S1 domainPROSITEPS50126S1coord: 16..102
score: 10.752
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 6..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8940contigM-pyrifera_M_contig8940:10176..11201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8940.20719.1mRNA_M-pyrifera_M_contig8940.20719.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8940 10176..11201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8940.20719.1 ID=prot_M-pyrifera_M_contig8940.20719.1|Name=mRNA_M-pyrifera_M_contig8940.20719.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
AATDNERRWIKDMKAGQKVIGYVSDTTDFAAFVDVGVVRQGAKGKVMPVT
GFLHQSEIRNPYALEGSGRAKSCEVEVKKGIHLTAYVKDVFPNAGRLTLS
LDPEMNKDKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold