prot_M-pyrifera_M_contig89394.20716.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89394.20716.1
Unique Nameprot_M-pyrifera_M_contig89394.20716.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length221
Homology
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A7S4ISZ1_9EUKA (Splicing factor YJU2 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ISZ1_9EUKA)

HSP 1 Score: 216 bits (550), Expect = 2.780e-67
Identity = 109/213 (51.17%), Postives = 151/213 (70.89%), Query Frame = 0
Query:    1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEP--WNDKDQKREEXXXXXXXXXDDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLED 211
            MGERKV+NKYY  DFDPSKLPKK + K+   K RVMLPMT+CC TCHE+IYKGKKFN+RKETV+GE+YLG+KI+RFYIKCTKC++ +TFKTDP++SDY  E+G TRN+EP  W  +++  +E          DA+AKLE +T+  K++M+++++LDELR L+ R     +++V   R+   EE+          EL  + FHNS   ++++ D
Sbjct:    1 MGERKVLNKYYPADFDPSKLPKKARPKNNQQKVRVMLPMTVCCDTCHEYIYKGKKFNSRKETVEGEEYLGIKIYRFYIKCTKCSSELTFKTDPEHSDYNAELGCTRNFEPYSWRSQEEAEKEKSKKKDEIESDAIAKLEQRTKQRKNEMEDIEKLDELRMLSGRNDSVPVDRVFEARR--LEEEAXXXXXX---ELASIVFHNSKDRVKKISD 208          
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A7C9CQA1_OPUST (Splicing factor YJU2 n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CQA1_OPUST)

HSP 1 Score: 213 bits (542), Expect = 8.120e-66
Identity = 113/216 (52.31%), Postives = 149/216 (68.98%), Query Frame = 0
Query:    1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKRE-EXXXXXXXXXDDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDDPSD 215
            MGERKV+NKYY PDFDP+K+P++++ K+  IK R+MLPM+I CSTC  +IYKG KFN+RKE V GE YLG++IFRFY KCTKC+  +  KTDP+NSDY  E GATRN+EPW DKD++ E E          DAM  LE++T   K +MD L  LDE+RS+  RQA   LE++L   Q+  EE+ R LE +DE  +  + FH     +RR++D+  D
Sbjct:    1 MGERKVLNKYYPPDFDPAKIPRRRQPKNQQIKVRMMLPMSIRCSTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAELAIKTDPQNSDYVVEAGATRNFEPWRDKDEELEQEKRKRDAEELGDAMKSLENRTLDSKREMDILAALDEMRSMKSRQATVSLEEMLEAIQRTGEEKERKLEEEDEALIKSI-FHGPKDTVRRIDDEEWD 215          
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A9TR65_PHYPA (Splicing factor YJU2 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TR65_PHYPA)

HSP 1 Score: 211 bits (537), Expect = 3.850e-65
Identity = 109/219 (49.77%), Postives = 150/219 (68.49%), Query Frame = 0
Query:    1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKREEXXXXXXXXX-DDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDDPSDAGG 218
            MGERKV+NKYY PDFDP+K+P++K+ K+  IK R+MLPM+I C+TC  +IYKG KFN+RKE V+GE YLG++IFRFY KC+KC+  +T KTDP+NSDY  E GA+RNYEPW   D+  +E           DAM  LE++T   K +MD +  LDE++S+  R A   +E ++A  ++   E+ + LE QDE  +  V F NSS F+RR++DD  +  G
Sbjct:    1 MGERKVLNKYYPPDFDPAKIPRRKQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVEGETYLGIQIFRFYFKCSKCSAELTMKTDPQNSDYIMETGASRNYEPWRATDEATDEAVKKREAEELGDAMKALENRTLDSKQEMDIMAALDEMKSMRSRHATVAVEDMMAALRRTAAEKDKELEEQDEAVIKSVIFQNSSKFVRRIDDDDLEDDG 219          
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A6B2LD55_9EUKA (Splicing factor YJU2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LD55_9EUKA)

HSP 1 Score: 211 bits (537), Expect = 8.480e-65
Identity = 116/224 (51.79%), Postives = 155/224 (69.20%), Query Frame = 0
Query:    1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKREEXXXXXXXXXD-DAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTF--HNSSTFIRRLEDDPSDAGGAVK 221
            MGERKV+NKYY PDFDP+ +P+ ++ K+   K R+M+PM+I C TC EFIYKGKKFNARKETV+GE+YLG+KIFRFY+KCT+C++ IT KTDPKNSDYTCE+GATRN+E W + ++  E+           +AM  LE+KT   K +MD LD LDE+RSLN + +  D  Q+L   QK  EE+  ++   DEEE+N +     +S   I+RL D+P +     K
Sbjct:    1 MGERKVLNKYYPPDFDPTLIPRARRPKNEQYKVRMMVPMSIRCLTCGEFIYKGKKFNARKETVQGEEYLGIKIFRFYVKCTRCSSEITIKTDPKNSDYTCEMGATRNFEGWKEGEKMMEQFRKQREEEEQGNAMKALENKTLDNKMEMDILDGLDEIRSLNAKASKVDPMQILEHIQKQEEEEEPSV---DEEEMNTLRLLEQSSDLPIKRLPDEPDEPSRTPK 221          
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A6P8EDY0_PUNGR (Splicing factor YJU2 n=4 Tax=Punica granatum TaxID=22663 RepID=A0A6P8EDY0_PUNGR)

HSP 1 Score: 214 bits (544), Expect = 8.530e-65
Identity = 108/213 (50.70%), Postives = 149/213 (69.95%), Query Frame = 0
Query:    1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKREEXXXXXXXXX-DDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDD 212
            MGERKV+NKYY PDFDPSKLP+ ++ K+  IK R+MLPM+I C+TC  +IYKG KFN+RKE V+GE YLG++IFRFY KCT+C+  +T KTDPKNSDY  E GATRN+EPW  +D++ +            DAM  LE++T   K +MD L  LDE++S+  R A   L+++LA  Q++  ++ + LE +DE  +  + FH S  F+RR+E+D
Sbjct:    1 MGERKVLNKYYPPDFDPSKLPRVRRDKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVEGEKYLGIQIFRFYFKCTRCSAELTMKTDPKNSDYVVESGATRNFEPWRAEDEEEDNVKRKREAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSLDEMLAALQRSSADKEKKLEDEDEALIKSIVFHGSKDFVRRIEED 213          
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: UPI0012F4FE67 (LOW QUALITY PROTEIN: splicing factor YJU2-like n=3 Tax=Benincaseae TaxID=1003877 RepID=UPI0012F4FE67)

HSP 1 Score: 212 bits (539), Expect = 1.290e-64
Identity = 108/222 (48.65%), Postives = 151/222 (68.02%), Query Frame = 0
Query:    1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKRE-EXXXXXXXXXDDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDDPSDAGGAVK 221
            MGERKV+NKYY PDFDPSKLP+ ++ K+  +K R+MLPM+I C+TC  +IYKG KFN+RKE V GE YLG++IFRFY KCT+C+  +  KTDP+NSDY  E GATRN+EPW ++D+  E E          DAM  LE++T   K +MD L  LDE++S+  R A   ++ +L   Q+   E+ + LE +DE  +  + F+NS++++RR+ DD  D G  V+
Sbjct:    1 MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTRCSAELXIKTDPQNSDYVVESGATRNFEPWREEDEASEKEKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQ 222          
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A0D9V0U0_9ORYZ (Splicing factor YJU2 n=15 Tax=Oryzeae TaxID=147380 RepID=A0A0D9V0U0_9ORYZ)

HSP 1 Score: 212 bits (539), Expect = 1.330e-64
Identity = 110/220 (50.00%), Postives = 153/220 (69.55%), Query Frame = 0
Query:    1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKRE-EXXXXXXXXXDDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAY----EEQMRALELQDEEELNEVTFHNSSTFIRRLEDDPSD 215
            MGERKV+NKYY PDFDPSK+P++++ K+  IK R+MLPM+I C TC  +IYKG KFN+RKE V+GE YLG++IFRFY KCTKC+  ITFKTDP+NSDYT E GA+RN+EPW ++D+  + E          DAM  LE++    K  MD L  L+E+RS+  R A   ++Q+L + +++     E+ +  L+ +DEE +  +TF NS  +I+R+EDD  D
Sbjct:    1 MGERKVLNKYYPPDFDPSKIPRRRQPKNQQIKVRMMLPMSIRCGTCGTYIYKGTKFNSRKEDVEGEKYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYTVESGASRNFEPWREEDEVADKEKRKRDEEEMGDAMKALENRAMDSKQDMDILAALEEMRSMKSRHAGVTVDQMLEILKRSAHDKEEKTVAELDEEDEELIKSITFRNSKDYIKRIEDDEDD 220          
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: C6TJQ5_SOYBN (Splicing factor YJU2 n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=C6TJQ5_SOYBN)

HSP 1 Score: 209 bits (532), Expect = 1.560e-64
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 0
Query:    1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKREEXXXXXXXXX-DDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDD 212
            MGERKV+NKYY PDFDPSKLP+ ++ K+  IK R+MLPM+I C+TC  +IYKG KFN+RKE V GE YLG++IFRFY KCTKC+  +T KTDP+NSDY  E GATRN+EPW  +D++ ++           DAM  LE++T   K +MD L  LDE++S+  R A   ++++L   Q+   ++ + LE +DE  +  V FHNS  F+RR+ D+
Sbjct:    1 MGERKVLNKYYPPDFDPSKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAEVTMKTDPQNSDYIVESGATRNFEPWRAEDEETDKMKEKREAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLEALQRTAADKEKRLEEEDEALIKSVVFHNSDGFVRRIRDE 213          
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A2K1IJA1_PHYPA (Splicing factor YJU2 n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IJA1_PHYPA)

HSP 1 Score: 211 bits (537), Expect = 5.240e-64
Identity = 109/219 (49.77%), Postives = 150/219 (68.49%), Query Frame = 0
Query:    1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKREEXXXXXXXXX-DDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDDPSDAGG 218
            MGERKV+NKYY PDFDP+K+P++K+ K+  IK R+MLPM+I C+TC  +IYKG KFN+RKE V+GE YLG++IFRFY KC+KC+  +T KTDP+NSDY  E GA+RNYEPW   D+  +E           DAM  LE++T   K +MD +  LDE++S+  R A   +E ++A  ++   E+ + LE QDE  +  V F NSS F+RR++DD  +  G
Sbjct:    1 MGERKVLNKYYPPDFDPAKIPRRKQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVEGETYLGIQIFRFYFKCSKCSAELTMKTDPQNSDYIMETGASRNYEPWRATDEATDEAVKKREAEELGDAMKALENRTLDSKQEMDIMAALDEMKSMRSRHATVAVEDMMAALRRTAAEKDKELEEQDEAVIKSVIFQNSSKFVRRIDDDDLEDDG 219          
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A6P6SFK2_COFAR (Splicing factor YJU2 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6SFK2_COFAR)

HSP 1 Score: 210 bits (535), Expect = 6.140e-64
Identity = 109/213 (51.17%), Postives = 151/213 (70.89%), Query Frame = 0
Query:    1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKRE-EXXXXXXXXXDDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDD 212
            MGERKV+NKYY PDFDP+K+P++++ K+  +K R+MLPM+I C+TC  +IYKG KFN+RKE V GE+YLG++IFRFY KCTKC+  IT+KTDPKNSDY  E GATRN+EPW  +D++ E E          DAM  LE++T   K +MD L  LDE++S+  RQA   ++ +L V Q+A EE+ R L  +DE  +  +   +S +++RR+ DD
Sbjct:    1 MGERKVLNKYYPPDFDPAKIPRRRQPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVAGENYLGIQIFRFYFKCTKCSAEITYKTDPKNSDYVVESGATRNFEPWRAEDEQVESEKRKRDSEEMGDAMKSLENRTLDSKREMDILAALDEVKSMKSRQASVSVDAMLEVLQRANEEKERKLFEEDEALIRSIFKGSSESYVRRINDD 213          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4ISZ1_9EUKA2.780e-6751.17Splicing factor YJU2 n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7C9CQA1_OPUST8.120e-6652.31Splicing factor YJU2 n=2 Tax=Opuntia streptacantha... [more]
A9TR65_PHYPA3.850e-6549.77Splicing factor YJU2 n=1 Tax=Physcomitrium patens ... [more]
A0A6B2LD55_9EUKA8.480e-6551.79Splicing factor YJU2 n=1 Tax=Arcella intermedia Ta... [more]
A0A6P8EDY0_PUNGR8.530e-6550.70Splicing factor YJU2 n=4 Tax=Punica granatum TaxID... [more]
UPI0012F4FE671.290e-6448.65LOW QUALITY PROTEIN: splicing factor YJU2-like n=3... [more]
A0A0D9V0U0_9ORYZ1.330e-6450.00Splicing factor YJU2 n=15 Tax=Oryzeae TaxID=147380... [more]
C6TJQ5_SOYBN1.560e-6450.23Splicing factor YJU2 n=2 Tax=Glycine subgen. Soja ... [more]
A0A2K1IJA1_PHYPA5.240e-6449.77Splicing factor YJU2 n=3 Tax=Physcomitrium patens ... [more]
A0A6P6SFK2_COFAR6.140e-6451.17Splicing factor YJU2 n=3 Tax=Coffea TaxID=13442 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 117..156
NoneNo IPR availableCOILSCoilCoilcoord: 176..196
NoneNo IPR availablePANTHERPTHR12111:SF1COILED-COIL DOMAIN-CONTAINING PROTEIN 94coord: 1..216
IPR007590Saf4/Yju2 proteinPFAMPF04502DUF572coord: 9..215
e-value: 3.5E-73
score: 247.1
IPR007590Saf4/Yju2 proteinPANTHERPTHR12111CELL CYCLE CONTROL PROTEIN CWF16-RELATEDcoord: 1..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89394contigM-pyrifera_M_contig89394:98..760 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89394.20716.1mRNA_M-pyrifera_M_contig89394.20716.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89394 98..760 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89394.20716.1 ID=prot_M-pyrifera_M_contig89394.20716.1|Name=mRNA_M-pyrifera_M_contig89394.20716.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp
MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFI
YKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTC
EIGATRNYEPWNDKDQKREEEEEQKKLEEDDAMAKLESKTEALKSQMDEL
DRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFH
NSSTFIRRLEDDPSDAGGAVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007590Saf4/Yju2